Contents:

• alleleCounts: Information about allele specific SNPs
• anova: Results of the ANOVA analysis for detecting regions with variable signal.
• deseq2: Results of DESeq analysis for detecting regions with differential signal levels.
• genomes: Fasta files with maternal and paternal genomes for all non-San individuals in the study. Genotype calls and BAM files with mapped sequencing reads for the San individuals are available through a data access agreement for transfer of genetic data by contacting the authors.
• mapped: Mapped ChIP-seq and RNA-seq reads.
• metadata: Information about the cell lines and experiments.
• motifs: Data for correlating H3K27Ac signal with motif disruptions.
• peakFiles: Peak calls.
• popSpecific: Regions with signal showing patterns specific to ancestry groups.
• signal: Genome-wide signal from the ChIP-seq experiments, as well as average signal on the consensus sets of peaks.
• transcriptomes: Personal transcriptomes of the non-San individuals and gene annotations.