chr	pos	id	ref	alt	mat	pat	unphased	ref	alt	tot
chr1	953678	rs142441326	T	C	FALSE	TRUE	FALSE	0	27	27
chr1	8937772	rs12047420	A	C	TRUE	FALSE	FALSE	1	33	39
chr1	9294903	rs3752547	C	G	TRUE	FALSE	FALSE	41	0	43
chr1	11968380	rs12065911	C	T	FALSE	TRUE	FALSE	1566	1257	2841
chr1	11969614	rs10864545	G	A	FALSE	TRUE	FALSE	159	280	442
chr1	19278332	rs191021519	G	A	TRUE	FALSE	FALSE	25	0	25
chr1	24294587	rs145191744	G	A	TRUE	FALSE	FALSE	21	0	21
chr1	24306394	rs138043793	G	A	TRUE	FALSE	FALSE	24	0	24
chr1	33502376	chr1_33502376_33502377	G	A	FALSE	TRUE	FALSE	25	0	25
chr1	67868236	rs7552823	T	A	TRUE	FALSE	FALSE	0	22	22
chr1	144533972	rs510680	G	C	FALSE	TRUE	FALSE	110	264	374
chr1	146556165	rs4950358	G	A	FALSE	TRUE	FALSE	379	218	600
chr1	148241360	rs75096758	C	T	TRUE	FALSE	FALSE	141	2	144
chr1	149783063	rs112586427	G	C	FALSE	TRUE	FALSE	0	267	267
chr1	149784572	rs143742768	G	A	TRUE	FALSE	FALSE	46	219	265
chr1	149813866	chr1_149813866_149813867	G	A	FALSE	TRUE	FALSE	0	54	54
chr1	150130428	rs140464876	G	A	TRUE	FALSE	FALSE	32	0	32
chr1	150293957	rs3767630	A	G	FALSE	TRUE	FALSE	27	0	27
chr1	156470578	rs145750530	C	T	TRUE	FALSE	FALSE	29	0	29
chr1	159016909	rs2852697	G	A	FALSE	TRUE	FALSE	0	27	27
chr1	181059932	rs41268466	G	T	TRUE	FALSE	FALSE	1	71	73
chr1	185285856	rs190430821	C	A	FALSE	TRUE	FALSE	21	0	21
chr1	203258887	rs149079681	C	T	TRUE	FALSE	FALSE	83	0	83
chr1	226250147	rs184029346	G	T	TRUE	FALSE	FALSE	36	0	36
chr1	234745468	rs191125037	G	A	FALSE	TRUE	FALSE	26	0	26
chr2	9771200	rs2091210	C	G	TRUE	FALSE	FALSE	0	48	48
chr2	65216384	rs113137939	C	G	TRUE	FALSE	FALSE	36	3	41
chr2	88315821	rs7603671	G	A	TRUE	FALSE	FALSE	240	109	351
chr2	88315833	rs7603677	G	T	TRUE	FALSE	FALSE	252	91	345
chr2	88315954	rs10169099	C	A	TRUE	FALSE	FALSE	242	87	331
chr2	162101505	rs78960211	C	G	TRUE	FALSE	FALSE	27	0	27
chr2	171838743	rs7371248	A	G	FALSE	TRUE	FALSE	0	32	32
chr2	201728141	rs6757272	A	G	TRUE	FALSE	FALSE	64	0	64
chr2	242212033	rs181225616	G	C	TRUE	FALSE	FALSE	21	0	23
chr2	242641566	rs111766881	C	T	FALSE	TRUE	FALSE	35	0	35
chr3	43732243	rs116844757	G	A	FALSE	TRUE	FALSE	30	0	30
chr3	57678638	chr3_57678638_57678639	T	C	FALSE	TRUE	FALSE	59	2	62
chr3	88108540	rs67376749	C	T	TRUE	FALSE	FALSE	24	0	24
chr3	149530709	rs192336430	A	C	TRUE	FALSE	FALSE	27	0	27
chr3	194209198	rs138377277	G	T	FALSE	TRUE	FALSE	0	23	23
chr3	195681394	rs2261195	G	C	TRUE	FALSE	FALSE	37	2	39
chr4	40209361	rs6846993	C	T	TRUE	FALSE	FALSE	0	40	40
chr4	69441494	rs185220098	G	T	FALSE	TRUE	FALSE	29	0	29
chr4	78078427	rs2306410	G	A	FALSE	TRUE	FALSE	46	0	46
chr4	95373056	rs192733830	C	T	FALSE	TRUE	FALSE	32	0	33
chr4	120376030	rs28408407	C	G	TRUE	FALSE	FALSE	0	25	25
chr4	139937167	rs183350335	C	T	TRUE	FALSE	FALSE	40	0	45
chr4	153449053	rs13146067	C	T	FALSE	TRUE	FALSE	27	0	28
chr5	43483656	rs188889340	G	C	TRUE	FALSE	FALSE	40	0	40
chr5	127419563	rs192047060	T	G	TRUE	FALSE	FALSE	140	0	140
chr5	134094312	rs145759038	G	T	TRUE	FALSE	FALSE	29	0	29
chr6	294783	rs2797315	G	C	FALSE	TRUE	FALSE	17	72	90
chr6	2861631	rs62391492	T	C	TRUE	FALSE	FALSE	17	64	81
chr6	2861678	rs62391493	T	G	TRUE	FALSE	FALSE	22	73	96
chr6	2861699	rs62391494	A	G	TRUE	FALSE	FALSE	17	77	95
chr6	2861792	rs11242805	C	A	TRUE	FALSE	FALSE	16	74	90
chr6	2861890	rs79596575	T	C	TRUE	FALSE	FALSE	16	87	104
chr6	2861894	rs59250834	A	G	TRUE	FALSE	FALSE	15	83	100
chr6	2861915	rs35855116	C	T	TRUE	FALSE	FALSE	15	91	107
chr6	2861960	rs391830	C	A	TRUE	FALSE	FALSE	13	91	104
chr6	2861984	rs446475	G	C	TRUE	FALSE	FALSE	13	90	103
chr6	2862053	rs414861	A	C	TRUE	FALSE	FALSE	13	84	98
chr6	2862115	rs391453	C	G	TRUE	FALSE	FALSE	22	76	99
chr6	3157975	rs2326176	T	C	TRUE	FALSE	FALSE	0	28	32
chr6	7910562	rs12202976	C	A	FALSE	TRUE	FALSE	25	0	25
chr6	13574491	rs112443954	G	C	TRUE	FALSE	FALSE	24	0	24
chr6	29915993	rs77402527	C	A	TRUE	FALSE	FALSE	45	6	52
chr6	30463202	rs185975512	A	T	TRUE	FALSE	FALSE	58	1	59
chr6	31234662	rs111362702	T	C	TRUE	FALSE	FALSE	1	64	66
chr6	31234666	rs112438263	G	A	TRUE	FALSE	FALSE	0	62	63
chr6	31234678	rs9264544	G	A	TRUE	FALSE	FALSE	0	62	63
chr6	31234681	rs9264545	T	C	TRUE	FALSE	FALSE	0	61	62
chr6	31234693	rs112357283	G	A	TRUE	FALSE	FALSE	0	63	64
chr6	31239296	rs116373865	G	C	FALSE	TRUE	FALSE	33	3	36
chr6	31324036	rs707912	T	A	FALSE	TRUE	FALSE	0	28	31
chr6	31324077	rs709053	C	G	FALSE	TRUE	FALSE	0	63	69
chr6	31324711	rs148606135	A	G	TRUE	FALSE	FALSE	0	120	247
chr6	31588707	rs193025229	C	T	TRUE	FALSE	FALSE	47	5	53
chr6	32413560	rs114244713	T	C	FALSE	TRUE	FALSE	58	0	58
chr6	32440405	rs116252348	G	A	TRUE	FALSE	FALSE	43	0	43
chr6	32440498	rs183900820	C	G	TRUE	FALSE	FALSE	43	0	44
chr6	32440535	rs115968694	T	A	TRUE	FALSE	FALSE	50	0	50
chr6	32497528	rs112688118	C	G	TRUE	FALSE	FALSE	0	101	101
chr6	32497581	rs75537275	G	A	TRUE	FALSE	FALSE	0	119	122
chr6	32497870	chr6_32497870_32497871	A	G	FALSE	TRUE	FALSE	0	179	184
chr6	32497943	rs74343539	A	G	FALSE	TRUE	FALSE	0	181	191
chr6	32497975	rs114195860	A	G	TRUE	FALSE	FALSE	182	0	190
chr6	32498033	rs71549221	G	A	FALSE	TRUE	FALSE	0	191	201
chr6	32542261	rs9269466	G	C	TRUE	FALSE	FALSE	0	21	22
chr6	32542638	rs34451186	T	C	TRUE	FALSE	FALSE	0	35	35
chr6	32542861	rs34087545	A	G	TRUE	FALSE	FALSE	0	52	52
chr6	32542919	rs36216604	A	G	TRUE	FALSE	FALSE	0	52	52
chr6	32542924	rs78343956	C	G	FALSE	TRUE	FALSE	50	0	51
chr6	32543310	rs114935195	A	G	TRUE	FALSE	FALSE	62	0	62
chr6	32543372	rs34190273	G	C	TRUE	FALSE	FALSE	64	0	65
chr6	32543374	rs185853348	G	A	TRUE	FALSE	FALSE	65	0	66
chr6	32543376	rs72847652	C	T	FALSE	TRUE	FALSE	0	65	66
chr6	32543594	rs9269518	T	C	TRUE	FALSE	FALSE	49	0	67
chr6	32543595	rs34373847	G	A	TRUE	FALSE	FALSE	47	0	66
chr6	32543610	rs9269519	T	A	TRUE	FALSE	FALSE	46	0	61
chr6	32543708	rs72847654	A	C	TRUE	FALSE	FALSE	0	57	76
chr6	32544772	rs9269579	G	A	FALSE	TRUE	FALSE	112	0	112
chr6	32545908	rs35326463	G	A	TRUE	FALSE	FALSE	98	0	98
chr6	32545956	rs34648027	C	T	TRUE	FALSE	FALSE	89	0	89
chr6	32545969	rs35940886	G	A	TRUE	FALSE	FALSE	91	0	91
chr6	32546091	rs9269654	G	T	TRUE	FALSE	FALSE	79	0	80
chr6	32552603	rs113342592	C	G	FALSE	TRUE	FALSE	0	35	35
chr6	32552617	rs28724138	G	A	TRUE	FALSE	FALSE	31	0	32
chr6	32557127	rs9270265	A	C	TRUE	FALSE	FALSE	178	0	180
chr6	32557435	rs9270299	A	C	TRUE	FALSE	FALSE	0	354	356
chr6	32604749	rs9272383	C	T	FALSE	TRUE	FALSE	0	44	44
chr6	33030324	rs116116821	C	G	FALSE	TRUE	FALSE	34	0	34
chr6	34543333	rs188948278	G	A	FALSE	TRUE	FALSE	22	0	22
chr6	64294600	rs138346519	C	G	FALSE	TRUE	FALSE	43	0	43
chr6	64296654	rs181508025	A	G	FALSE	TRUE	FALSE	46	0	46
chr6	117996818	rs9767451	T	C	TRUE	FALSE	FALSE	0	28	28
chr6	153303758	rs11961379	G	A	FALSE	TRUE	FALSE	27	0	27
chr6	153306749	rs3757063	T	G	FALSE	TRUE	FALSE	0	21	21
chr6	160148518	rs182631265	G	C	TRUE	FALSE	FALSE	31	0	33
chr7	102789752	rs114427579	G	C	FALSE	TRUE	FALSE	35	0	35
chr7	104654012	rs189872374	C	A	FALSE	TRUE	FALSE	350	0	352
chr7	155089334	rs185720846	C	T	FALSE	TRUE	FALSE	38	0	43
chr8	33371146	rs2581897	T	G	TRUE	FALSE	FALSE	121	254	375
chr8	33371150	rs2581898	A	G	TRUE	FALSE	FALSE	126	246	372
chr8	33371199	rs2581899	T	C	TRUE	FALSE	FALSE	120	239	359
chr8	33371296	rs12682118	T	C	TRUE	FALSE	FALSE	90	194	285
chr8	42249423	rs148297103	C	G	TRUE	FALSE	FALSE	25	0	25
chr9	6682940	rs7019327	T	C	TRUE	FALSE	FALSE	0	26	26
chr9	35079913	rs10972302	T	C	TRUE	FALSE	FALSE	30	0	30
chr9	35647347	rs3138084	G	A	FALSE	TRUE	FALSE	24	0	24
chr9	91987872	rs117049476	G	A	FALSE	TRUE	FALSE	25	0	25
chr9	92039982	rs12686034	C	T	TRUE	FALSE	FALSE	23	0	23
chr9	139622450	rs2275158	G	T	TRUE	FALSE	FALSE	52	129	193
chr10	14227416	rs4750480	G	C	TRUE	FALSE	FALSE	232	134	369
chr10	14227426	rs79026977	C	G	FALSE	TRUE	FALSE	136	257	396
chr10	14227502	rs4750481	G	A	TRUE	FALSE	FALSE	351	156	510
chr10	14626563	rs72768940	A	G	FALSE	TRUE	FALSE	23	0	23
chr10	74086903	rs147844821	C	T	FALSE	TRUE	FALSE	54	151	205
chr10	97641804	rs9888076	A	G	FALSE	TRUE	FALSE	28	0	28
chr10	119806281	rs2928113	G	A	FALSE	TRUE	FALSE	0	32	32
chr10	121632284	rs190287657	T	G	FALSE	TRUE	FALSE	23	0	23
chr11	2720927	rs12360708	C	T	TRUE	FALSE	FALSE	43	0	43
chr11	65191208	rs512715	C	G	TRUE	FALSE	FALSE	405	0	406
chr11	65624562	rs667555	A	C	TRUE	FALSE	FALSE	63	0	63
chr11	65625191	rs7947929	G	A	TRUE	FALSE	FALSE	50	1	53
chr12	740009	rs34038797	C	G	FALSE	TRUE	FALSE	34	2	36
chr12	46750673	rs146428538	G	A	TRUE	FALSE	FALSE	64	0	64
chr12	49520330	rs7952771	A	G	FALSE	TRUE	FALSE	0	66	67
chr12	64845715	rs61933190	G	A	FALSE	TRUE	FALSE	27	0	31
chr12	92799586	rs382943	A	C	FALSE	TRUE	FALSE	4	33	37
chr13	42848646	rs2122243	C	T	TRUE	FALSE	FALSE	0	58	58
chr13	42899488	rs188750784	A	G	FALSE	TRUE	FALSE	22	0	22
chr13	77601316	rs9573986	G	A	FALSE	TRUE	FALSE	30	0	30
chr14	69260101	rs189164456	C	A	FALSE	TRUE	FALSE	37	0	37
chr14	70722384	rs117981850	G	A	FALSE	TRUE	FALSE	43	6	49
chr14	81937095	rs185782379	T	C	TRUE	FALSE	FALSE	22	0	22
chr14	106040392	rs77141261	T	A	TRUE	FALSE	FALSE	0	24	24
chr14	106052265	rs7149006	T	C	TRUE	FALSE	FALSE	56	0	61
chr14	106054895	rs74784025	A	T	TRUE	FALSE	FALSE	48	0	54
chr14	106166475	rs7494440	C	G	TRUE	FALSE	FALSE	93	29	129
chr14	106173358	rs4983644	G	C	FALSE	TRUE	FALSE	0	54	54
chr14	106330231	rs146731323	C	G	FALSE	TRUE	FALSE	56	1	64
chr14	106354804	rs2753525	G	C	TRUE	FALSE	FALSE	1	35	36
chr14	106354876	rs2753526	C	A	TRUE	FALSE	FALSE	0	27	27
chr14	106355135	rs2753527	C	T	TRUE	FALSE	FALSE	8	46	54
chr14	106478947	rs11160908	A	T	FALSE	TRUE	FALSE	2	37	39
chr14	106479019	rs11160909	T	C	FALSE	TRUE	FALSE	1	36	37
chr14	106479202	rs11160912	C	T	FALSE	TRUE	FALSE	0	24	24
chr14	106479209	rs11160913	G	A	FALSE	TRUE	FALSE	0	27	27
chr14	106479681	rs4774049	C	T	FALSE	TRUE	FALSE	0	24	24
chr14	106494503	rs17705658	G	A	TRUE	FALSE	FALSE	2	112	114
chr14	106494719	rs113328667	G	A	TRUE	FALSE	FALSE	2	46	48
chr14	106726921	rs34585892	T	G	FALSE	TRUE	FALSE	22	0	22
chr14	106727214	rs116725500	T	A	TRUE	FALSE	FALSE	34	0	34
chr14	106727219	rs114362897	T	A	TRUE	FALSE	FALSE	36	0	36
chr14	106727391	rs118044334	A	G	TRUE	FALSE	FALSE	26	0	26
chr14	107035142	rs61732461	G	A	FALSE	TRUE	FALSE	3	96	99
chr14	107035738	rs72686851	C	T	FALSE	TRUE	FALSE	0	53	53
chr14	107154684	rs2078689	G	A	TRUE	FALSE	FALSE	41	4	45
chr15	79213076	rs186333341	A	T	FALSE	TRUE	FALSE	24	0	24
chr16	3493288	rs34496784	T	C	TRUE	FALSE	FALSE	0	22	22
chr16	3493301	rs7500590	T	C	TRUE	FALSE	FALSE	0	24	24
chr16	3493495	rs2270497	G	A	FALSE	TRUE	FALSE	26	0	26
chr16	12068788	rs420203	C	T	FALSE	TRUE	FALSE	0	28	38
chr16	21531494	rs42138	T	C	TRUE	FALSE	FALSE	16	77	99
chr16	67184645	rs77560733	C	G	FALSE	TRUE	FALSE	21	0	21
chr16	67266958	rs184319213	C	A	FALSE	TRUE	FALSE	21	0	21
chr16	81846780	rs61066239	A	G	FALSE	TRUE	FALSE	26	0	26
chr16	87426121	chr16_87426121_87426122	G	C	TRUE	FALSE	FALSE	46	0	56
chr16	88851591	rs192674267	G	A	TRUE	FALSE	FALSE	82	0	82
chr17	6843541	rs8077286	G	A	TRUE	FALSE	FALSE	1	25	26
chr17	7739130	rs139094949	C	T	TRUE	FALSE	FALSE	27	0	27
chr17	8103744	rs190467253	C	T	FALSE	TRUE	FALSE	43	0	43
chr17	16285491	chr17_16285491_16285492	C	T	TRUE	FALSE	FALSE	42	0	43
chr17	18966931	rs149907303	G	T	TRUE	FALSE	FALSE	1389	471	1861
chr17	21188099	rs55767533	C	T	TRUE	FALSE	FALSE	37	0	37
chr17	30669055	rs116565498	C	G	FALSE	TRUE	FALSE	22	0	22
chr17	33700578	rs9303685	T	C	FALSE	TRUE	FALSE	147	70	217
chr17	37001634	rs9902888	A	T	FALSE	TRUE	FALSE	0	37	37
chr17	41437430	rs67532907	T	C	TRUE	FALSE	FALSE	151	3	154
chr17	43661378	rs142358383	C	T	TRUE	FALSE	FALSE	28	2	31
chr17	43661726	rs117220447	C	A	TRUE	FALSE	FALSE	38	2	40
chr17	43661751	rs141513735	T	A	TRUE	FALSE	FALSE	45	1	46
chr17	43661801	rs118027466	T	G	TRUE	FALSE	FALSE	55	2	57
chr17	43661810	rs117712464	G	A	TRUE	FALSE	FALSE	50	1	51
chr17	43661817	rs117067401	C	T	TRUE	FALSE	FALSE	48	1	49
chr17	43661959	rs112163495	T	C	TRUE	FALSE	FALSE	45	2	49
chr17	46126116	rs12602010	G	A	TRUE	FALSE	FALSE	16	91	107
chr17	48943852	rs113347817	G	A	TRUE	FALSE	FALSE	190	0	190
chr17	56736473	rs654778	A	C	TRUE	FALSE	FALSE	596	398	997
chr17	56736532	rs76345714	C	T	FALSE	TRUE	FALSE	349	628	982
chr17	56736547	rs35797125	G	A	TRUE	FALSE	FALSE	678	296	979
chr17	56736640	rs34275691	A	T	TRUE	FALSE	FALSE	334	178	516
chr17	60556316	rs181111123	G	A	FALSE	TRUE	FALSE	24	0	25
chr17	62915457	rs150478486	G	A	FALSE	TRUE	FALSE	44	0	44
chr17	66287598	rs113239651	G	A	FALSE	TRUE	FALSE	23	0	23
chr17	79268934	rs117190386	G	A	FALSE	TRUE	FALSE	33	0	34
chr17	79472412	rs11150793	G	T	FALSE	TRUE	FALSE	0	72	76
chr17	80031998	rs112802447	A	G	TRUE	FALSE	FALSE	30	0	30
chr18	13613329	rs77519747	C	A	TRUE	FALSE	FALSE	22	0	22
chr18	13613586	rs118101894	A	G	TRUE	FALSE	FALSE	48	0	48
chr18	48724724	rs3819118	C	T	TRUE	FALSE	FALSE	32	0	32
chr18	77748503	rs188197587	C	T	FALSE	TRUE	FALSE	35	0	35
chr19	2038259	rs142973467	G	T	TRUE	FALSE	FALSE	24	0	26
chr19	2042035	chr19_2042035_2042036	T	C	TRUE	FALSE	FALSE	45	0	45
chr19	2067027	rs10405303	A	G	FALSE	TRUE	FALSE	0	27	43
chr19	2081523	rs10403078	G	T	FALSE	TRUE	FALSE	23	0	26
chr19	2084778	rs12172871	T	C	TRUE	FALSE	FALSE	0	30	30
chr19	12904440	rs10409385	A	G	TRUE	FALSE	FALSE	178	1	180
chr19	36209073	rs189776176	T	G	TRUE	FALSE	FALSE	45	0	45
chr19	56110700	rs3803890	G	A	FALSE	TRUE	FALSE	44	0	44
chr20	2633380	rs6115306	G	A	FALSE	TRUE	FALSE	9	153	163
chr20	18488565	rs191080034	T	G	FALSE	TRUE	FALSE	27	0	28
chr20	18488569	rs183263921	A	G	FALSE	TRUE	FALSE	30	0	30
chr20	33292218	rs187514699	A	C	FALSE	TRUE	FALSE	24	0	28
chr20	37502637	rs208804	T	G	TRUE	FALSE	FALSE	0	21	21
chr20	39657517	rs140822387	C	A	FALSE	TRUE	FALSE	71	0	71
chr20	43514380	rs139992012	C	G	TRUE	FALSE	FALSE	29	0	29
chr20	47906439	rs150976154	C	T	TRUE	FALSE	FALSE	71	0	84
chr20	47907072	rs146588877	G	A	TRUE	FALSE	FALSE	39	0	41
chr21	45578954	rs11702506	G	A	FALSE	TRUE	FALSE	28	0	28
chr22	23244065	rs4822339	A	G	TRUE	FALSE	FALSE	109	35	144
chr22	23244269	rs4822340	T	C	TRUE	FALSE	FALSE	84	25	109
chr22	23244310	rs364790	A	G	TRUE	FALSE	FALSE	92	29	121
chr22	23249354	rs2519501	C	T	FALSE	TRUE	FALSE	128	33	161
chr22	23249390	rs2856875	A	G	FALSE	TRUE	FALSE	138	33	172
chr22	29196494	rs5762809	C	T	TRUE	FALSE	FALSE	168	0	168
chr22	29664906	rs2857460	C	T	FALSE	TRUE	FALSE	21	0	21
chr22	37619333	rs9622582	G	T	TRUE	FALSE	FALSE	0	21	21
chr22	42311097	rs62240987	G	A	FALSE	TRUE	FALSE	25	0	25
chrX	12967594	rs113500987	A	G	TRUE	FALSE	FALSE	17	68	85
chrX	12967890	rs1947953	G	T	TRUE	FALSE	FALSE	19	82	101
chrX	12993511	rs115781169	C	T	TRUE	FALSE	FALSE	184	329	514
chrX	12995214	rs1057185	C	T	TRUE	FALSE	FALSE	85	262	348
chrX	12996312	rs12690381	T	C	FALSE	TRUE	FALSE	349	151	500
chrX	153686654	rs183781909	T	G	TRUE	FALSE	FALSE	42	0	42