chr pos id ref alt mat pat unphased ref alt tot chr1 1840677 rs4298676 G A TRUE FALSE FALSE 29 0 30 chr1 28417903 rs76890118 G A FALSE TRUE FALSE 106 16 123 chr1 39558211 rs12118033 G A TRUE FALSE FALSE 73 0 73 chr1 43379036 rs35601043 C T FALSE TRUE FALSE 0 24 24 chr1 43379046 rs34503263 T C FALSE TRUE FALSE 0 23 23 chr1 44502263 rs74335545 G A TRUE FALSE FALSE 45 0 45 chr1 85410544 rs666779 C T FALSE TRUE FALSE 121 12 133 chr1 157281111 rs1338681 G T FALSE TRUE FALSE 8 46 54 chr1 157281120 rs1338680 A C FALSE TRUE FALSE 7 43 51 chr1 209422399 rs76990004 G C FALSE TRUE FALSE 53 0 54 chr1 211822542 rs12741252 G C TRUE FALSE FALSE 25 0 25 chr1 223900130 rs2154114 A C TRUE FALSE FALSE 38 0 38 chr2 28976403 rs4665434 A G TRUE FALSE FALSE 10 50 60 chr2 30146008 rs11685881 G T FALSE TRUE FALSE 32 0 33 chr2 86448231 rs749581 T C TRUE FALSE FALSE 7 57 65 chr2 86448408 rs749579 A G TRUE FALSE FALSE 25 149 174 chr2 86448420 rs889911 T C TRUE FALSE FALSE 24 144 168 chr2 89249715 rs115700132 T C FALSE TRUE FALSE 22 0 23 chr2 102941561 rs11123921 C G TRUE FALSE FALSE 28 0 28 chr2 120048550 rs11123513 A T TRUE FALSE FALSE 34 3 37 chr2 120048584 rs75076683 T G FALSE TRUE FALSE 9 46 57 chr2 126229920 rs10176024 T C FALSE TRUE FALSE 55 10 66 chr2 136555237 rs192601955 A T FALSE TRUE FALSE 32 1 33 chr2 232422661 rs2442319 T C FALSE TRUE FALSE 51 9 61 chr3 5068824 rs9857639 T A FALSE TRUE FALSE 32 0 33 chr3 15440556 rs6442522 C T FALSE TRUE FALSE 62 6 68 chr3 47563770 rs77980086 G A FALSE TRUE FALSE 232 55 290 chr4 39979484 rs537353 G C TRUE FALSE FALSE 0 50 50 chr4 185021627 rs12499263 C A TRUE FALSE FALSE 39 0 39 chr5 34538242 rs4703456 C T TRUE FALSE FALSE 1 26 27 chr5 34538274 rs10040197 C A FALSE TRUE FALSE 26 1 28 chr5 61519677 rs34721637 C T TRUE FALSE FALSE 0 23 23 chr5 64779899 rs245529 T C FALSE TRUE FALSE 32 3 35 chr5 71074689 rs10061615 A C TRUE FALSE FALSE 5 68 74 chr5 94073658 rs10043446 G A FALSE TRUE FALSE 0 98 99 chr5 99959864 rs247931 C G FALSE TRUE FALSE 24 0 25 chr5 107817039 rs182912749 G A FALSE TRUE FALSE 41 0 41 chr5 135223166 rs187771152 T C FALSE TRUE FALSE 88 2 90 chr5 148494438 rs114088758 C T TRUE FALSE FALSE 38 0 38 chr5 150677643 rs6898671 T A TRUE FALSE FALSE 26 1 27 chr6 625071 rs17756712 A G TRUE FALSE FALSE 2 33 35 chr6 625188 rs17135931 C A TRUE FALSE FALSE 1 29 31 chr6 32659822 rs115144232 G T FALSE TRUE FALSE 21 71 92 chr6 32659839 rs115626550 G A TRUE FALSE FALSE 71 19 90 chr6 32659878 rs115164175 A G TRUE FALSE FALSE 72 22 94 chr6 32659994 rs115206134 C T TRUE FALSE FALSE 167 48 216 chr6 32660023 rs116560215 T C TRUE FALSE FALSE 157 49 206 chr6 32660051 rs116427207 T C TRUE FALSE FALSE 114 37 151 chr6 32660153 rs115499889 T G TRUE FALSE FALSE 68 14 82 chr6 32660170 rs114215692 T C TRUE FALSE FALSE 63 13 76 chr6 51928492 rs115918703 A C TRUE FALSE FALSE 29 2 31 chr6 131520994 rs3903759 C A TRUE FALSE FALSE 67 9 77 chr7 23584496 rs11767307 C G FALSE TRUE FALSE 54 1 56 chr7 23584522 rs11767313 C A FALSE TRUE FALSE 67 1 69 chr7 23584702 rs7799435 C T FALSE TRUE FALSE 89 1 90 chr7 38393857 rs185718891 C T FALSE TRUE FALSE 24 0 25 chr7 70294323 rs10245302 A C FALSE TRUE FALSE 45 3 48 chr7 70294421 rs62459597 G A TRUE FALSE FALSE 0 46 48 chr7 97557614 rs140888281 G A FALSE TRUE FALSE 28 0 28 chr7 97798117 rs884897 G A TRUE FALSE FALSE 96 24 121 chr7 106433605 rs150746092 T C FALSE TRUE FALSE 113 0 117 chr8 12523146 rs657939 C G FALSE TRUE FALSE 0 32 32 chr8 17581937 rs2904725 C A FALSE TRUE FALSE 0 31 31 chr8 71580993 rs7012619 T G FALSE TRUE FALSE 1 25 29 chr8 71581006 rs268645 T G FALSE TRUE FALSE 0 25 29 chr8 126243100 rs16900452 G A TRUE FALSE FALSE 32 0 32 chr8 135695242 rs2376 A C FALSE TRUE FALSE 91 26 117 chr9 19465057 rs10757061 G T TRUE FALSE FALSE 22 0 22 chr9 26856757 rs147276436 C T FALSE TRUE FALSE 23 0 23 chr10 31040980 rs10826861 A G FALSE TRUE FALSE 8 117 126 chr10 31041134 rs10826862 A G FALSE TRUE FALSE 4 59 63 chr10 31041221 rs11812218 G A FALSE TRUE FALSE 1 29 30 chr10 60144998 rs2279339 C A FALSE TRUE FALSE 30 2 32 chr10 79151998 rs11819263 A G FALSE TRUE FALSE 0 22 23 chr11 1650156 rs1021343 C G TRUE FALSE FALSE 26 0 34 chr11 2021075 rs2107425 C T TRUE FALSE FALSE 84 0 85 chr11 2021164 rs2071094 G T FALSE TRUE FALSE 0 74 75 chr11 2021206 rs10732516 G A FALSE TRUE FALSE 0 92 93 chr11 2021815 rs2735970 T C TRUE FALSE FALSE 27 0 31 chr11 2021859 rs4930101 G T FALSE TRUE FALSE 0 32 33 chr11 2021980 rs2525883 C T TRUE FALSE FALSE 39 0 40 chr11 2022023 rs10840167 G T FALSE TRUE FALSE 0 46 47 chr11 8405881 rs7121032 A G FALSE TRUE FALSE 82 4 88 chr11 13977729 rs186808276 T C TRUE FALSE FALSE 46 0 46 chr11 60084005 rs10431137 T G TRUE FALSE FALSE 2 36 38 chr11 67481388 rs11530816 C T FALSE TRUE FALSE 1 32 33 chr11 76445293 rs56274763 C A FALSE TRUE FALSE 30 2 33 chr11 94336322 rs55873762 G A TRUE FALSE FALSE 0 22 22 chr11 94336431 rs489591 T C TRUE FALSE FALSE 0 53 53 chr11 102483573 rs1711414 T C FALSE TRUE FALSE 0 23 23 chr12 562562 rs35665247 C T FALSE TRUE FALSE 2 32 34 chr12 8384447 rs180732366 C T TRUE FALSE FALSE 95 0 96 chr12 8384575 rs149591761 G A TRUE FALSE FALSE 44 0 45 chr12 8384576 rs144216983 T C TRUE FALSE FALSE 44 0 45 chr13 21063524 rs3764092 A G TRUE FALSE FALSE 7 89 97 chr13 25542622 rs2497553 G A TRUE FALSE FALSE 77 20 161 chr13 25542744 rs7985492 G A TRUE FALSE FALSE 0 84 139 chr13 25542763 rs7987482 A G TRUE FALSE FALSE 0 71 120 chr13 46292453 rs186080277 C A TRUE FALSE FALSE 63 0 79 chr13 50244041 rs9535292 T C FALSE TRUE FALSE 72 23 96 chr14 24527672 rs7146599 G A FALSE TRUE FALSE 98 8 106 chr14 72759177 rs2238202 T G FALSE TRUE FALSE 49 0 49 chr14 93153412 rs61994063 G A FALSE TRUE FALSE 56 7 63 chr14 105435649 rs736066 A G FALSE TRUE FALSE 37 1 38 chr15 22387710 rs150199589 A C FALSE TRUE FALSE 25 1 26 chr15 22462009 rs182726083 G A FALSE TRUE FALSE 25 1 26 chr15 31093497 rs117270209 T G FALSE TRUE FALSE 49 0 49 chr15 40567237 rs56205728 G A TRUE FALSE FALSE 45 0 46 chr15 81567752 rs11637313 C A FALSE TRUE FALSE 2 30 32 chr15 90701060 rs187852545 A G FALSE TRUE FALSE 53 0 53 chr15 98965091 rs8030363 T G FALSE TRUE FALSE 33 1 35 chr16 60846 rs180886835 A G TRUE FALSE FALSE 2 36 38 chr16 70199000 rs58560028 C G FALSE TRUE FALSE 77 18 95 chr16 87943295 rs8054247 G A FALSE TRUE FALSE 0 67 67 chr16 89707783 rs58290281 C T FALSE TRUE FALSE 47 1 48 chr17 21220113 rs1657681 G C TRUE FALSE FALSE 47 7 54 chr17 34838864 rs191574216 G A TRUE FALSE FALSE 69 18 88 chr17 44270809 rs117037949 A G TRUE FALSE FALSE 57 8 79 chr17 63133374 rs184239462 C A FALSE TRUE FALSE 0 67 67 chr17 73267432 rs145539737 C T TRUE FALSE FALSE 53 0 54 chr17 77083809 rs143210804 C T TRUE FALSE FALSE 78 1 80 chr18 839510 rs73945617 C T TRUE FALSE FALSE 66 12 79 chr18 9575764 rs12458145 C T TRUE FALSE FALSE 32 1 34 chr19 664931 rs6510873 G A FALSE TRUE FALSE 0 36 36 chr19 12876964 rs897804 G C TRUE FALSE FALSE 40 0 40 chr19 19052144 rs113059278 T G TRUE FALSE FALSE 0 22 23 chr19 51520200 rs2569451 C T FALSE TRUE FALSE 24 0 24 chr20 2981750 rs13037313 G A TRUE FALSE FALSE 49 3 52 chr20 23024250 rs1986208 T G TRUE FALSE FALSE 0 22 22 chr20 37419286 rs2077109 T C TRUE FALSE FALSE 1 28 29 chr20 47493894 rs34116853 A C TRUE FALSE FALSE 0 31 31 chr20 47494005 rs13037473 T C TRUE FALSE FALSE 1 72 73 chr21 32458977 rs7275278 T G TRUE FALSE FALSE 131 57 189 chr21 34199097 rs59107325 T C FALSE TRUE FALSE 53 6 59 chr21 43973721 rs78452055 A G FALSE TRUE FALSE 0 25 25 chr21 46976111 rs3746988 C T FALSE TRUE FALSE 40 1 41 chr22 23027436 rs420217 C T FALSE TRUE FALSE 1 32 34 chr22 23027592 rs139491109 T G TRUE FALSE FALSE 63 9 73 chr22 23027696 rs449068 A G FALSE TRUE FALSE 2 47 50 chr22 23035479 rs147026968 C A TRUE FALSE FALSE 13 62 75 chr22 24655669 rs3876094 G A FALSE TRUE FALSE 0 27 27 chr22 37594801 rs11912364 A T FALSE TRUE FALSE 54 0 54 chr22 39795683 rs4821892 G C TRUE FALSE FALSE 4 42 46 chr22 43216550 rs4820486 G A TRUE FALSE FALSE 32 3 35 chr22 45665159 rs9615096 G A TRUE FALSE FALSE 35 0 36 chrX 1767846 rs149182561 G A TRUE FALSE FALSE 0 41 41 chrX 13506378 rs5934106 T A TRUE FALSE FALSE 91 33 125 chrX 24414279 rs5944691 T C FALSE TRUE FALSE 9 54 63 chrX 41301672 rs5963986 C T FALSE TRUE FALSE 24 0 24 chrX 45374534 rs12844803 T C TRUE FALSE FALSE 8 50 58 chrX 56810194 rs4826507 A T FALSE TRUE FALSE 38 0 38 chrX 56815467 rs5960804 G C FALSE TRUE FALSE 60 1 63 chrX 69653782 rs11094153 G A FALSE TRUE FALSE 0 46 46 chrX 118864172 rs6645595 T C TRUE FALSE FALSE 58 11 69 chrX 122967328 rs3005849 T C FALSE TRUE FALSE 7 73 80 chrX 130875051 rs872840 C T TRUE FALSE FALSE 0 37 37 chrX 130875204 rs28629363 T G FALSE TRUE FALSE 58 0 58 chrX 130902299 rs41312598 C T FALSE TRUE FALSE 31 1 32 chrX 130926556 rs2070289 A G TRUE FALSE FALSE 6 47 53 chrX 130956219 rs34119186 G C TRUE FALSE FALSE 0 22 22 chrX 131747243 rs151765 G C TRUE FALSE FALSE 55 11 67 chrX 153402278 rs5987216 A G FALSE TRUE FALSE 36 1 37 chrX 154209158 rs3861554 T C TRUE FALSE FALSE 11 69 80 chrX 154285851 rs2051161 C G TRUE FALSE FALSE 4 41 46