chr pos id ref alt mat pat unphased ref alt tot chr1 145382222 rs72701838 A G TRUE FALSE TRUE 22 0 38 chr1 145382228 rs72701839 A G TRUE FALSE TRUE 25 0 44 chr1 145382440 rs72701841 G A FALSE TRUE TRUE 48 0 67 chr2 61703319 rs10206089 G A TRUE FALSE FALSE 59 1 60 chr2 89156124 rs232231 G C FALSE TRUE TRUE 80 239 320 chr2 89157282 rs232229 T A TRUE FALSE FALSE 224 93 317 chr2 89158971 rs232228 G A FALSE TRUE TRUE 28 104 207 chr2 89159113 rs72847505 C G TRUE FALSE FALSE 51 154 281 chr2 89159254 rs115496172 T C TRUE FALSE FALSE 76 206 285 chr2 89159538 rs72847508 T A TRUE FALSE FALSE 42 140 263 chr2 89159558 rs72847509 T C TRUE FALSE FALSE 44 138 274 chr2 89159694 rs232225 T A FALSE TRUE TRUE 29 119 253 chr2 89161547 rs232222 A G TRUE FALSE FALSE 70 7 77 chr2 89161932 rs232221 C A TRUE FALSE FALSE 51 4 55 chr2 89163315 rs72847535 T G TRUE FALSE FALSE 5 65 70 chr2 89163765 rs116443209 T C TRUE FALSE FALSE 3 55 58 chr2 89163769 rs115554021 G C TRUE FALSE FALSE 3 55 58 chr2 89163792 rs72847537 A T TRUE FALSE FALSE 3 53 56 chr2 89164214 rs12996118 C T FALSE TRUE FALSE 68 2 70 chr2 89164295 rs72847538 A T TRUE FALSE FALSE 2 56 58 chr2 89164316 rs72847539 A T TRUE FALSE FALSE 3 56 59 chr2 89165189 rs232218 A C TRUE FALSE FALSE 7 100 107 chr2 89165310 rs72847541 C T TRUE FALSE FALSE 6 99 105 chr2 89165726 rs1825473 A G TRUE FALSE FALSE 14 98 112 chr2 89185274 rs116639073 C T TRUE FALSE FALSE 57 347 405 chr2 89185298 rs115012529 T A TRUE FALSE FALSE 62 330 393 chr2 89185306 rs116145501 A C TRUE FALSE FALSE 60 334 397 chr2 89185406 rs72847567 T C TRUE FALSE FALSE 62 326 391 chr2 89185454 rs72847569 T C TRUE FALSE FALSE 66 257 326 chr2 89185478 rs7606636 T A TRUE FALSE FALSE 59 239 301 chr2 89185596 rs72847570 T A TRUE FALSE FALSE 65 192 263 chr2 242050870 rs2310873 C T FALSE TRUE FALSE 24 0 24 chr2 242050876 rs2871621 A G FALSE TRUE FALSE 23 0 23 chr2 242050909 rs2310872 T C FALSE TRUE FALSE 24 0 24 chr2 242051063 rs2871620 G A FALSE TRUE FALSE 25 0 25 chr2 242051128 rs4993875 C T FALSE TRUE FALSE 30 1 31 chr3 195790022 rs499591 A T TRUE FALSE FALSE 0 24 24 chr4 122722368 rs3828485 G A FALSE TRUE FALSE 76 24 100 chr5 178986632 rs7703730 C A TRUE FALSE FALSE 2 38 40 chr6 26987900 rs9379952 A T FALSE TRUE FALSE 0 24 24 chr6 27706180 rs9468213 G A FALSE TRUE TRUE 27 0 27 chr6 27799527 rs425335 T C FALSE TRUE FALSE 58 6 64 chr6 29648398 rs150682661 G C FALSE TRUE FALSE 0 22 22 chr6 29648468 rs146095326 C T FALSE TRUE FALSE 0 26 26 chr6 29648506 rs149874677 G A FALSE TRUE FALSE 0 23 23 chr6 29648564 rs143362605 C T FALSE TRUE FALSE 0 21 21 chr6 32441100 rs114475122 A C FALSE TRUE FALSE 53 13 66 chr6 32441199 rs116822583 A G FALSE TRUE FALSE 71 24 95 chr6 32441268 rs114569551 G A FALSE TRUE FALSE 83 13 96 chr6 32493536 rs72508452 T A FALSE TRUE FALSE 23 0 23 chr6 32544828 rs35652190 T A FALSE TRUE FALSE 24 0 24 chr6 32544844 rs9269586 T C FALSE TRUE FALSE 26 0 26 chr6 32544871 rs34768485 C A FALSE TRUE FALSE 28 0 28 chr6 32545218 rs9269610 C T FALSE TRUE FALSE 45 8 59 chr6 32545482 rs28626306 C G TRUE FALSE FALSE 25 1 44 chr6 32545862 rs9269640 C T FALSE TRUE FALSE 45 7 53 chr6 32545877 rs9269642 G T FALSE TRUE FALSE 46 9 56 chr6 32552779 rs9270003 C T FALSE TRUE FALSE 21 0 25 chr6 32554097 rs9270071 G A FALSE TRUE FALSE 27 0 27 chr6 32557009 rs112431275 G A FALSE TRUE FALSE 31 0 32 chr6 32577975 rs78910197;rs79499995 C T FALSE TRUE FALSE 26 75 102 chr6 32577981 rs77997669;rs79931283 A G FALSE TRUE FALSE 24 73 98 chr6 32578040 rs78571923 C G FALSE TRUE FALSE 18 66 84 chr6 32578127 rs75749245 A G FALSE TRUE FALSE 11 59 70 chr6 32578143 rs1281937 T C FALSE TRUE FALSE 10 51 61 chr6 32604929 rs9272406 G C FALSE TRUE FALSE 42 0 42 chr6 32605043 rs74223456 C T FALSE TRUE FALSE 95 31 126 chr6 32605738 rs77394587 G A FALSE TRUE FALSE 21 0 21 chr6 32606085 rs79500493 A T FALSE TRUE FALSE 37 4 41 chr6 32606878 rs9272544 G A FALSE TRUE FALSE 22 0 22 chr6 32607666 rs9272602 G A FALSE TRUE FALSE 27 0 27 chr6 32607674 rs9272603 G A FALSE TRUE FALSE 28 0 28 chr6 32610960 rs1142447 G A FALSE TRUE FALSE 21 0 21 chr6 32611040 rs9272937 C A FALSE TRUE FALSE 28 2 30 chr6 32611128 rs9272953 C A FALSE TRUE FALSE 25 0 25 chr6 32611147 rs9272956 T G FALSE TRUE FALSE 26 0 26 chr6 32611275 rs1065049 C A FALSE TRUE FALSE 30 2 32 chr6 32611289 rs9272969 A G FALSE TRUE FALSE 29 2 31 chr6 32611302 rs9272971 G C FALSE TRUE FALSE 30 2 32 chr6 32611472 rs78074767 A G FALSE TRUE FALSE 39 0 39 chr6 32611531 rs77484723 T C FALSE TRUE FALSE 38 0 39 chr6 32612627 rs9273109 A G FALSE TRUE FALSE 29 1 30 chr6 32613537 rs9273200 C T FALSE TRUE FALSE 37 0 37 chr6 32613573 rs9273206 T C FALSE TRUE FALSE 41 0 41 chr6 32613610 rs9273209 C T FALSE TRUE FALSE 37 0 37 chr6 32613712 rs9273215 G A FALSE TRUE FALSE 42 0 42 chr6 32613824 rs9273226 C T FALSE TRUE FALSE 28 0 28 chr6 32614025 rs9273241 C T FALSE TRUE FALSE 21 0 21 chr6 32614080 rs9273242 T C FALSE TRUE FALSE 22 0 22 chr6 32614127 rs3998176 C G FALSE TRUE FALSE 24 0 24 chr6 32614318 rs9273265 G A FALSE TRUE FALSE 34 0 34 chr6 32614419 rs72852237 C A FALSE TRUE FALSE 42 0 42 chr6 32614511 rs9273288 T A FALSE TRUE FALSE 52 2 54 chr6 32614534 rs9273289 T A FALSE TRUE FALSE 48 2 50 chr6 32614575 rs9273294 C A FALSE TRUE FALSE 44 2 46 chr6 32614705 rs17843563 T G FALSE TRUE FALSE 37 5 42 chr6 32614706 rs17612475 G A FALSE TRUE FALSE 37 5 42 chr6 32615470 rs17612583 G A FALSE TRUE FALSE 37 5 42 chr6 32615702 rs17612625 A C FALSE TRUE FALSE 34 4 38 chr6 32615710 rs17612633 G C FALSE TRUE FALSE 31 3 34 chr6 32616003 rs17612727 G T TRUE FALSE FALSE 25 0 32 chr6 32616004 rs17612734 A G TRUE FALSE FALSE 24 0 31 chr6 32626786 rs75046732 G C FALSE TRUE FALSE 48 4 52 chr6 32626801 rs76527298 C T FALSE TRUE FALSE 43 4 47 chr6 32626920 rs36206058 C G FALSE TRUE FALSE 52 3 55 chr6 32626925 rs9273382 A G FALSE TRUE FALSE 53 3 56 chr6 32626952 rs4713572 T C FALSE TRUE FALSE 51 3 54 chr6 32626977 rs75974034 T C FALSE TRUE FALSE 49 2 51 chr6 32627038 rs4713574 C G FALSE TRUE FALSE 44 0 44 chr6 32627105 rs9273396 T A FALSE TRUE FALSE 35 2 37 chr6 32627117 rs9273399 C A FALSE TRUE FALSE 32 3 35 chr6 32627128 rs9273400 C T FALSE TRUE FALSE 34 4 38 chr6 32627211 rs17580696 T C FALSE TRUE FALSE 35 3 38 chr6 32627235 rs36204528 C T FALSE TRUE FALSE 37 3 40 chr6 32627250 rs74974352 C A FALSE TRUE FALSE 38 3 41 chr6 32627352 rs9273417 A G FALSE TRUE FALSE 26 1 27 chr6 32627434 rs9273426 A C FALSE TRUE FALSE 43 0 43 chr6 32627441 rs9273427 A C FALSE TRUE FALSE 40 0 40 chr6 32627460 rs9273430 T G FALSE TRUE FALSE 36 0 36 chr6 32627535 rs75682559 G T FALSE TRUE FALSE 36 3 39 chr6 32627561 rs9273440 T C FALSE TRUE FALSE 41 6 47 chr6 32627573 rs9273441 C G FALSE TRUE FALSE 47 9 56 chr6 32627600 rs75423994 G T FALSE TRUE FALSE 42 8 50 chr6 32627812 rs9273453 C G FALSE TRUE FALSE 30 3 33 chr6 32627830 rs9273455 C T FALSE TRUE FALSE 25 1 26 chr6 32627906 rs1063349 T C FALSE TRUE FALSE 34 4 38 chr6 32627923 rs9273462 A G FALSE TRUE FALSE 36 4 40 chr6 32627934 rs9273463 G A FALSE TRUE FALSE 37 4 41 chr6 32628784 rs3020628 C A FALSE TRUE FALSE 26 0 26 chr6 32628812 rs9273542 C T FALSE TRUE FALSE 27 1 28 chr6 32628873 rs9273549 C T FALSE TRUE FALSE 38 3 41 chr6 32628998 rs9273561 T C FALSE TRUE FALSE 27 1 28 chr6 32629240 rs9273671 G A FALSE TRUE FALSE 24 0 24 chr6 32629443 rs9273777 T C FALSE TRUE FALSE 25 1 26 chr6 32629447 rs9273781 A G FALSE TRUE FALSE 25 1 26 chr6 32629462 rs76003709 C A FALSE TRUE FALSE 26 1 27 chr6 32629582 rs9273841 C T FALSE TRUE FALSE 25 1 26 chr6 32630349 rs9274171 G T FALSE TRUE FALSE 29 0 29 chr6 32630856 rs17843720 C T FALSE TRUE FALSE 28 2 30 chr6 32630862 rs17843721 G A FALSE TRUE FALSE 30 2 32 chr6 32630868 rs9274211 T C FALSE TRUE FALSE 32 2 34 chr6 32631130 rs17613636 G A FALSE TRUE FALSE 22 0 22 chr6 32631149 rs9274228 C T FALSE TRUE FALSE 26 0 26 chr6 32631332 rs9274250 A G FALSE TRUE FALSE 27 0 28 chr6 32631343 rs9274251 T C FALSE TRUE FALSE 24 0 25 chr6 32631348 rs9274253 G A FALSE TRUE FALSE 24 0 25 chr6 32631426 rs17843727 G A FALSE TRUE FALSE 23 0 23 chr6 32631783 rs9274284 G A FALSE TRUE FALSE 22 0 22 chr6 32631958 rs9274299 C T FALSE TRUE FALSE 21 0 21 chr6 32632832 rs77051381 A T FALSE TRUE FALSE 31 0 31 chr6 32632850 rs74203793 G A FALSE TRUE FALSE 39 0 39 chr6 32633131 rs9274436 C G FALSE TRUE FALSE 34 0 34 chr6 32633174 rs9274437 C T FALSE TRUE FALSE 31 0 31 chr6 32633181 rs9274438 T C FALSE TRUE FALSE 28 0 28 chr6 32633196 rs9274440 A G FALSE TRUE FALSE 29 0 29 chr6 32633290 rs9274449 G C FALSE TRUE FALSE 25 0 25 chr6 32633334 rs9274450 A G FALSE TRUE FALSE 26 0 26 chr6 32633786 rs9274482 C T FALSE TRUE FALSE 28 2 30 chr6 32634243 rs9274514 G A FALSE TRUE FALSE 135 25 160 chr6 32634736 rs9274546 C T FALSE TRUE FALSE 73 0 73 chr6 32634834 rs9274551 C T FALSE TRUE FALSE 58 0 58 chr6 32634838 rs9274552 A C FALSE TRUE FALSE 61 0 61 chr6 32634922 rs4403294 A G FALSE TRUE FALSE 39 1 40 chr6 32635345 rs9274580 G A FALSE TRUE FALSE 27 0 27 chr6 32635965 rs78923219 G T FALSE TRUE FALSE 39 6 45 chr6 32635990 rs9274622 T C FALSE TRUE FALSE 44 6 50 chr6 32635998 rs9274623 G T FALSE TRUE FALSE 48 7 55 chr6 32636021 rs9274624 G A FALSE TRUE FALSE 44 8 52 chr7 2913761 rs73035212 T C FALSE TRUE FALSE 102 17 119 chr7 2913859 rs73035221 T A FALSE TRUE FALSE 95 29 124 chr7 2913873 rs1182141 T C FALSE TRUE FALSE 85 32 117 chr7 123173055 rs2402662 A C TRUE FALSE TRUE 0 35 35 chr8 2584334 rs10866942 G C FALSE TRUE FALSE 0 21 21 chr8 2584602 rs4602917 G A FALSE TRUE FALSE 0 29 29 chr8 2585193 rs4273876 T C FALSE TRUE FALSE 0 25 25 chr8 66556187 rs10504389 C T TRUE FALSE FALSE 2 44 46 chr8 77912608 rs12156404 A T TRUE FALSE FALSE 61 14 75 chr8 98290358 rs2028480 C G TRUE FALSE FALSE 38 3 41 chr8 101718932 rs62513920 C G TRUE FALSE FALSE 26 0 26 chr8 128248893 rs35464775 A T FALSE TRUE FALSE 2 29 31 chr9 128172963 rs35278449 C G TRUE FALSE FALSE 0 37 37 chr10 47640757 rs11259762 T C TRUE FALSE TRUE 23 0 25 chr10 134149493 rs12770367 C G FALSE TRUE FALSE 55 0 55 chr11 764925 rs72844779 C T FALSE TRUE TRUE 21 0 21 chr11 82682918 rs10751084 C G TRUE FALSE FALSE 3 41 44 chr11 134124614 rs1551182 T C FALSE TRUE FALSE 38 3 41 chr12 9517254 rs4883248 T C TRUE FALSE FALSE 36 5 41 chr12 9517421 rs759897 T A FALSE TRUE FALSE 5 42 47 chr12 9517521 rs61914427 T C TRUE FALSE FALSE 33 3 36 chr12 31960649 rs73074046 A G FALSE TRUE FALSE 40 2 42 chr12 31961154 rs7297941 C T FALSE TRUE FALSE 25 0 25 chr14 78108555 rs12050437 T A TRUE FALSE FALSE 0 21 21 chr14 96180242 rs1122138 C A TRUE FALSE FALSE 44 1 45 chr14 106319953 rs72715449 A G TRUE FALSE FALSE 77 16 97 chr14 106320092 rs2256346 C T FALSE TRUE FALSE 38 180 218 chr14 106322972 rs1956596 G A FALSE TRUE FALSE 35 114 149 chr14 106326538 rs72715451 G C TRUE FALSE FALSE 158 52 210 chr14 106326658 rs72715453 C T TRUE FALSE FALSE 189 55 245 chr14 106326733 rs980847 A G FALSE TRUE FALSE 58 192 250 chr14 106326951 rs72715454 A G TRUE FALSE FALSE 220 58 278 chr14 106327472 rs72715455 T A TRUE FALSE FALSE 191 58 249 chr14 106327507 rs114127635 G A TRUE FALSE FALSE 185 61 246 chr14 106327553 rs72715456 T C TRUE FALSE FALSE 187 66 253 chr14 106327561 rs72715459 T G TRUE FALSE FALSE 189 69 258 chr14 106328066 rs1950942 G A FALSE TRUE FALSE 89 209 298 chr14 106329230 rs72715464 C G TRUE FALSE FALSE 31 203 234 chr14 106329597 rs114994021 T C FALSE TRUE FALSE 157 0 157 chr14 106405671 rs114619038 C T TRUE FALSE FALSE 0 90 108 chr14 106405699 rs72715478 G C TRUE FALSE FALSE 1 120 141 chr14 106405720 rs72715479 A G TRUE FALSE FALSE 0 122 140 chr14 106405726 rs72715480 T C TRUE FALSE FALSE 0 129 145 chr14 106405752 rs72715481 G A TRUE FALSE FALSE 0 164 173 chr14 106405791 rs72715482 C G TRUE FALSE FALSE 0 203 208 chr14 106405811 rs72715485 C T TRUE FALSE FALSE 0 230 232 chr14 106405877 rs72715486 T C TRUE FALSE FALSE 0 286 286 chr14 106407400 rs28572221 T C FALSE TRUE FALSE 21 0 21 chr15 30917948 rs66537352 A T FALSE TRUE FALSE 68 20 88 chr15 30917975 rs67010207 G A FALSE TRUE FALSE 72 21 93 chr16 3493288 rs34496784 T C FALSE TRUE FALSE 25 0 25 chr16 3493301 rs7500590 T C FALSE TRUE FALSE 32 0 32 chr16 84549076 rs7206840 A C TRUE FALSE FALSE 0 22 22 chr16 84549077 rs7184461 G A TRUE FALSE FALSE 0 22 22 chr17 33571309 rs57708672 G T TRUE FALSE FALSE 0 57 58 chr17 33571546 rs11080327 G A TRUE FALSE FALSE 1 46 47 chr17 37360844 rs72823350 G A FALSE TRUE TRUE 31 0 31 chr19 1653120 rs114329775 G A FALSE TRUE FALSE 20 65 85 chr19 4328860 rs11882358 T C TRUE FALSE FALSE 2 37 39 chr19 21182797 rs73012909 C T TRUE FALSE FALSE 3 37 40 chr19 54040951 rs73051515 C T FALSE TRUE FALSE 21 0 21 chr19 54057515 rs73051558 G A TRUE FALSE FALSE 0 21 21 chr22 42836337 rs1016110 A C TRUE FALSE TRUE 2 32 34