chr pos id ref alt mat pat unphased ref alt tot chr1 101840225 rs72721688 G T FALSE TRUE FALSE 54 12 66 chr1 117945526 rs114463574 A G FALSE TRUE FALSE 24 0 24 chr1 143534395 rs1910917 C T FALSE TRUE TRUE 4 51 55 chr1 143536192 rs1394965 C T FALSE TRUE FALSE 4 47 52 chr1 227759413 rs116590853 G A FALSE TRUE TRUE 31 0 31 chr1 227759804 rs115702054 A C TRUE FALSE FALSE 23 0 23 chr2 103418042 rs72829935 A G FALSE TRUE TRUE 28 0 31 chr2 133035666 rs72873970 T C FALSE TRUE TRUE 27 0 28 chr2 160123808 rs11692684 T A FALSE TRUE FALSE 0 22 24 chr2 232833937 rs72985638 A T FALSE TRUE FALSE 45 0 45 chr2 233827837 rs56285358 A G FALSE TRUE FALSE 22 0 22 chr2 234776751 rs968402 G A FALSE TRUE FALSE 7 43 50 chr3 2574570 rs968345 A G FALSE TRUE FALSE 14 56 70 chr3 10210705 rs113971397 G A TRUE FALSE TRUE 43 0 43 chr3 75776525 rs114394783 A G FALSE TRUE FALSE 25 1 26 chr3 75783445 rs62250094 T C FALSE TRUE FALSE 25 1 26 chr3 75789724 rs114806663 T A FALSE TRUE FALSE 38 0 39 chr3 75803082 rs78538385 C T FALSE TRUE FALSE 28 0 28 chr3 75815849 rs75931477 A G TRUE FALSE TRUE 23 0 23 chr3 75819728 rs73119212 G A FALSE TRUE TRUE 28 0 28 chr3 75829398 rs114589339 A G FALSE TRUE FALSE 41 0 41 chr3 75831091 rs73119235 G A FALSE TRUE FALSE 40 0 48 chr3 94976592 rs1516594 C T FALSE TRUE FALSE 0 22 22 chr3 101700690 rs73145801 C T FALSE TRUE FALSE 22 0 22 chr3 130638086 rs2685176 T C FALSE TRUE FALSE 0 33 33 chr3 131417010 rs9790058 T C FALSE TRUE TRUE 0 26 26 chr3 134219177 rs2102006 G A FALSE TRUE FALSE 0 49 49 chr3 184779186 rs7643248 A T TRUE FALSE FALSE 5 47 52 chr3 184779640 rs7624065 G C TRUE FALSE FALSE 6 50 56 chr3 184779724 rs6444019 C T TRUE FALSE FALSE 6 44 50 chr3 189650940 rs57298408 C T FALSE TRUE FALSE 0 27 27 chr3 195080491 rs10439949 T C FALSE TRUE FALSE 0 30 30 chr3 196474051 rs74800520 T G FALSE TRUE TRUE 1 59 60 chr4 123652 rs68114480 C T TRUE FALSE FALSE 57 9 66 chr4 391353 rs6850477 T C FALSE TRUE FALSE 0 23 23 chr4 2772530 rs7695151 C T FALSE TRUE FALSE 33 4 37 chr4 4063249 rs74283669 A C FALSE TRUE TRUE 23 0 25 chr4 17207604 rs665701 C G FALSE TRUE FALSE 1 31 32 chr4 17208345 rs16894651 C T TRUE FALSE FALSE 45 3 48 chr4 33846387 rs73222454 A C TRUE FALSE TRUE 23 0 28 chr4 76971549 rs72653654 C T FALSE TRUE FALSE 34 0 34 chr4 79727994 rs115379127 C T TRUE FALSE FALSE 46 3 57 chr4 106013319 rs7677094 A T FALSE TRUE FALSE 0 33 35 chr4 118161819 rs6835976 G T TRUE FALSE TRUE 0 21 21 chr4 147404605 rs79396811 A C FALSE TRUE FALSE 0 24 25 chr4 185220978 rs72699785 A T TRUE FALSE FALSE 31 0 31 chr4 185272616 rs1087298 G A FALSE TRUE TRUE 87 31 118 chr4 185835314 rs114463524 C A FALSE TRUE FALSE 22 0 25 chr4 190861469 rs76255305 T A FALSE TRUE FALSE 34 2 37 chr5 5529574 rs2591707 A T TRUE FALSE FALSE 0 23 23 chr5 68462438 rs350104 C T FALSE TRUE FALSE 12 56 68 chr5 93401464 rs72788363 A C TRUE FALSE FALSE 23 0 23 chr5 149155039 rs11738917 G C FALSE TRUE FALSE 36 2 38 chr6 2937836 rs9503344 C A FALSE TRUE FALSE 9 46 55 chr6 9862914 rs9477086 G C FALSE TRUE FALSE 0 22 22 chr6 15324885 rs4715973 T G TRUE FALSE TRUE 2 36 42 chr6 24497044 rs114525642 C T FALSE TRUE FALSE 41 0 41 chr6 31303316 rs116177144 T C FALSE TRUE FALSE 0 25 25 chr6 31304632 rs115459037 G A TRUE FALSE FALSE 36 4 42 chr6 31304648 rs114859113 G A FALSE TRUE FALSE 4 39 45 chr6 31304835 rs116232570 G C TRUE FALSE FALSE 41 2 45 chr6 31305073 rs115719026 T G TRUE FALSE FALSE 71 0 79 chr6 32423294 rs116667649 C G FALSE TRUE FALSE 0 21 21 chr6 32439504 rs112101943 A T TRUE FALSE TRUE 28 1 30 chr6 32497671 rs113253021 G A FALSE TRUE FALSE 23 0 31 chr6 32504474 rs114718923 T C FALSE TRUE FALSE 0 25 28 chr6 32504482 rs115004986 C T FALSE TRUE FALSE 0 28 29 chr6 32504490 rs72851072 C T FALSE TRUE FALSE 0 27 28 chr6 32504774 rs111499810 G A FALSE TRUE FALSE 1 32 33 chr6 32504823 rs113901242 C G FALSE TRUE FALSE 1 25 26 chr6 32511769 rs113208493 G T TRUE FALSE TRUE 22 0 22 chr6 33090758 rs115483322 T C TRUE FALSE FALSE 26 1 27 chr6 57355785 rs34318625 G A FALSE TRUE TRUE 23 0 23 chr6 57530548 rs35095015 G A TRUE FALSE FALSE 22 0 32 chr6 91195411 rs115471950 T G FALSE TRUE FALSE 35 0 35 chr6 135806219 rs9402706 T G FALSE TRUE FALSE 1 38 39 chr6 136086597 rs10872444 A T TRUE FALSE FALSE 0 21 21 chr6 161206905 rs79545658 G A TRUE FALSE FALSE 31 1 34 chr6 164262602 rs73021064 G A TRUE FALSE FALSE 35 1 36 chr7 57928332 rs114353764 C T TRUE FALSE TRUE 22 0 22 chr7 64388527 rs73137839 C A TRUE FALSE FALSE 38 0 38 chr7 64459453 rs73141510 C T FALSE TRUE FALSE 64 0 65 chr7 64459454 rs73141512 C T FALSE TRUE FALSE 64 0 65 chr7 97602653 rs73140974 T C FALSE TRUE FALSE 0 21 21 chr7 98284923 rs116073644 A G FALSE TRUE FALSE 24 0 26 chr8 38525991 rs4733937 C G TRUE FALSE FALSE 0 22 23 chr8 81932938 rs55987663 A G FALSE TRUE FALSE 55 0 55 chr9 21185034 rs115329802 G T TRUE FALSE FALSE 22 0 22 chr9 131614160 rs72758873 T C TRUE FALSE TRUE 38 0 38 chr9 132201465 rs114282019 C T FALSE TRUE FALSE 35 0 35 chr10 7671052 rs115454981 A T FALSE TRUE FALSE 31 0 31 chr10 32600252 rs11008875 A C TRUE FALSE TRUE 0 23 23 chr10 38330237 rs74816299 A T TRUE FALSE FALSE 28 0 28 chr10 42645005 rs72785913 T C FALSE TRUE TRUE 25 0 26 chr10 42830921 rs67760003 G C FALSE TRUE TRUE 26 1 27 chr10 61614418 rs1709342 A G FALSE TRUE TRUE 24 0 26 chr10 74387198 rs3000972 C T TRUE FALSE FALSE 0 24 24 chr10 76393385 rs114800282 G T FALSE TRUE FALSE 23 0 23 chr10 90838585 rs2252139 C G FALSE TRUE TRUE 1 26 27 chr10 123437483 rs731594 T G TRUE FALSE TRUE 33 0 34 chr10 135305082 rs2094641 C A FALSE TRUE FALSE 2 33 35 chr11 3611768 rs76652404 T A FALSE TRUE FALSE 25 0 25 chr11 67997248 rs113998889 A T TRUE FALSE FALSE 59 0 59 chr11 77076891 rs72941623 G A TRUE FALSE FALSE 25 1 26 chr11 96018828 rs516174 A G FALSE TRUE TRUE 0 36 36 chr12 10519418 rs76992224 G T TRUE FALSE TRUE 26 0 26 chr12 10519481 rs113634937 C A TRUE FALSE TRUE 26 0 26 chr12 14398912 rs73054794 C T FALSE TRUE FALSE 0 31 31 chr12 20913853 rs4762776 A G FALSE TRUE FALSE 0 21 21 chr12 24978410 rs79612162 T G TRUE FALSE TRUE 0 22 22 chr12 69204251 rs1196336 A T FALSE TRUE TRUE 2 75 78 chr12 121619974 rs2568001 A C FALSE TRUE FALSE 4 38 43 chr12 125633366 rs114037179 C A FALSE TRUE FALSE 33 3 44 chr12 133648404 rs115133045 G T TRUE FALSE FALSE 0 25 25 chr12 133671295 rs115797595 C T TRUE FALSE TRUE 25 0 39 chr13 33353436 rs2032507 A T TRUE FALSE FALSE 0 21 21 chr14 29315642 rs116555505 G A TRUE FALSE FALSE 29 0 29 chr14 93258982 rs1018538 T A TRUE FALSE TRUE 0 22 22 chr15 41175053 rs11070302 T A TRUE FALSE FALSE 0 81 98 chr15 58669774 rs72740830 T C FALSE TRUE FALSE 22 0 22 chr15 85715561 rs115288264 C T FALSE TRUE FALSE 22 0 22 chr16 3481470 rs37820 G C TRUE FALSE FALSE 5 44 49 chr16 15948285 rs9933130 C G FALSE TRUE FALSE 35 3 38 chr16 18783295 rs114671527 A T TRUE FALSE FALSE 57 3 60 chr16 62715065 rs114291014 G C FALSE TRUE FALSE 22 0 22 chr17 5087723 rs2641233 A T FALSE TRUE FALSE 0 70 70 chr17 15611255 rs3760301 C A FALSE TRUE FALSE 0 43 44 chr17 67073372 rs72850343 A G FALSE TRUE FALSE 25 0 25 chr17 76471352 rs116826317 G A FALSE TRUE FALSE 22 0 22 chr18 9601213 rs9676119 T G TRUE FALSE TRUE 1 35 36 chr18 10934181 rs264250 C T TRUE FALSE FALSE 15 61 76 chr18 59668499 rs72934387 T C TRUE FALSE TRUE 22 0 22 chr19 12661121 rs7507417 A T FALSE TRUE FALSE 0 21 22 chr19 16168051 rs74739574 G A FALSE TRUE TRUE 45 0 45 chr19 19840859 rs73006775 T C TRUE FALSE FALSE 38 0 44 chr19 19907901 rs73008611 A T FALSE TRUE TRUE 52 0 52 chr19 20047692 rs73008678 G A FALSE TRUE TRUE 29 0 31 chr19 21354021 rs73028556 A G TRUE FALSE FALSE 23 0 23 chr19 21354024 rs73028558 G T TRUE FALSE FALSE 26 0 26 chr19 21388741 rs7246432 T C FALSE TRUE FALSE 0 21 21 chr19 21492722 rs114788316 G A FALSE TRUE TRUE 23 0 26 chr19 21665874 rs115252488 C G FALSE TRUE TRUE 23 0 23 chr19 21665876 rs115654532 A G FALSE TRUE TRUE 23 0 23 chr19 21700995 rs73019716 C T FALSE TRUE FALSE 23 0 28 chr19 21708705 rs73019744 G A TRUE FALSE TRUE 24 0 24 chr19 21749529 rs76013465 T C FALSE TRUE TRUE 30 1 31 chr19 21760085 rs73027746 A G TRUE FALSE TRUE 21 0 22 chr19 21919934 rs8105002 A T TRUE FALSE TRUE 0 37 37 chr19 21923704 rs73020291 C T TRUE FALSE FALSE 21 0 21 chr19 21923842 rs73020296 C A TRUE FALSE TRUE 23 0 23 chr19 22005036 rs80237265 A G TRUE FALSE FALSE 21 0 21 chr19 23412120 rs73012473 C T TRUE FALSE TRUE 28 0 32 chr19 24213589 rs62117578 G T FALSE TRUE FALSE 2 29 31 chr19 24213795 rs66888990 T A FALSE TRUE FALSE 5 37 42 chr19 24213865 rs62117579 C T FALSE TRUE FALSE 4 44 48 chr19 24306253 rs73021448 C T TRUE FALSE FALSE 27 0 27 chr19 37132987 rs1464831 G A FALSE TRUE FALSE 28 0 28 chr19 37152770 rs11667894 C A FALSE TRUE FALSE 32 0 32 chr19 37162857 rs10403456 C T FALSE TRUE FALSE 28 0 28 chr19 37162921 rs67995015 A G FALSE TRUE FALSE 34 0 36 chr19 37168885 rs8100381 T C FALSE TRUE FALSE 21 0 21 chr19 37180297 rs17272386 A G TRUE FALSE TRUE 30 0 30 chr19 37185408 rs76403080 C T FALSE TRUE FALSE 27 0 28 chr19 37272978 rs74581476 A G FALSE TRUE FALSE 25 0 25 chr19 51905574 rs73066861 G A TRUE FALSE FALSE 55 0 55 chr19 53225649 rs6509681 T C FALSE TRUE TRUE 0 25 25 chr19 53357149 rs73069441 G T TRUE FALSE TRUE 24 0 25 chr19 53872342 rs72483988 C T FALSE TRUE TRUE 22 0 22 chr19 53938312 rs111417803 T G FALSE TRUE FALSE 50 0 50 chr20 11199607 rs6078102 C T TRUE FALSE FALSE 42 4 46 chr20 11199629 rs6033061 A G TRUE FALSE FALSE 45 5 50 chr20 17883653 rs2618649 A G FALSE TRUE TRUE 44 8 52 chr20 17884041 rs8121302 T C TRUE FALSE TRUE 9 73 82 chr21 15456266 rs79263540 T C TRUE FALSE FALSE 21 0 25 chr21 15456302 rs73151510 C T TRUE FALSE FALSE 24 0 28 chr21 35619833 rs111845190 C T TRUE FALSE FALSE 33 0 34 chr22 20659557 rs11090371 C A FALSE TRUE TRUE 5 40 45 chrX 9646398 rs12011618 A G TRUE FALSE FALSE 14 57 71 chrX 49969770 rs67671217 T G TRUE FALSE TRUE 23 0 28 chrX 58323142 rs114832030 T A FALSE TRUE FALSE 21 0 21 chrX 88458922 rs115036545 G C TRUE FALSE FALSE 36 0 36 chrX 116889191 rs5956790 C T TRUE FALSE FALSE 36 5 41