chr pos id ref alt mat pat unphased ref alt tot chr1 17231687 rs9435780 C T TRUE FALSE FALSE 395 63 622 chr1 17231951 rs7412249 A G TRUE FALSE FALSE 304 91 396 chr1 46212631 rs28584711 C T TRUE FALSE FALSE 45 2 47 chr1 147806874 rs2999607 G C FALSE TRUE FALSE 186 351 539 chr2 38060887 rs13005878 G C TRUE FALSE FALSE 23 0 23 chr2 89160073 rs116162069 T A TRUE FALSE FALSE 124 30 253 chr2 89160390 rs116668961 G A TRUE FALSE FALSE 10 165 180 chr2 89160683 rs75553379 T C TRUE FALSE FALSE 4 144 148 chr2 89160691 rs115487104 T A TRUE FALSE FALSE 4 153 157 chr2 89160715 rs115655195 T G TRUE FALSE FALSE 3 133 136 chr2 89160730 rs115126804 T G TRUE FALSE FALSE 4 125 129 chr2 89160739 rs72847527 T C TRUE FALSE FALSE 5 124 129 chr2 89160763 rs72847528 A C TRUE FALSE FALSE 3 115 119 chr2 89160931 rs72847529 A T TRUE FALSE FALSE 5 42 47 chr2 90247848 rs842143 C A TRUE FALSE FALSE 1 28 29 chr3 73045651 rs9816164 T C FALSE TRUE FALSE 7 46 53 chr3 152224114 rs7643339 T C FALSE TRUE FALSE 27 1 28 chr3 152224148 rs11717758 G A FALSE TRUE FALSE 35 2 37 chr3 170582336 rs1818533 A G TRUE FALSE FALSE 4 36 40 chr4 147043053 rs72727921 C T FALSE TRUE FALSE 46 2 48 chr4 165877990 rs9762579 G T TRUE FALSE TRUE 61 15 78 chr6 26104057 rs198854 T C TRUE FALSE FALSE 44 110 156 chr6 28072602 rs2281588 G A FALSE TRUE TRUE 73 16 89 chr6 31325090 rs137939159 C T FALSE TRUE FALSE 0 45 45 chr6 32497671 rs113253021 G A FALSE TRUE FALSE 43 0 55 chr6 32544173 rs71538600 T C FALSE TRUE TRUE 0 33 33 chr6 32544561 rs71540414 G A TRUE FALSE TRUE 43 0 44 chr6 32557253 rs9270278 C G FALSE TRUE TRUE 24 0 83 chr6 32986677 rs114506098 G T TRUE FALSE FALSE 2 39 41 chr9 137764457 rs6537952 G A TRUE FALSE FALSE 26 0 26 chr9 139618838 rs945383 C A FALSE TRUE FALSE 0 29 29 chr11 44087715 rs178513 T G FALSE TRUE TRUE 37 1 40 chr12 740009 rs34038797 C G FALSE TRUE FALSE 74 19 93 chr12 9517550 rs880369 C T FALSE TRUE FALSE 34 2 36 chr13 23458194 rs35752126 G A FALSE TRUE FALSE 0 23 23 chr14 106069497 rs72713343 C T TRUE FALSE FALSE 9 47 56 chr14 106069618 rs72713344 G A TRUE FALSE FALSE 9 46 55 chr14 106091947 rs114669830 C T FALSE TRUE FALSE 109 2 111 chr14 106326733 rs980847 A G FALSE TRUE FALSE 109 14 125 chr14 106328066 rs1950942 G A FALSE TRUE FALSE 156 27 189 chr14 106329287 rs13379369 G A FALSE TRUE FALSE 97 16 119 chr16 10885936 rs72785634 C T FALSE TRUE FALSE 75 16 91 chr17 33571309 rs57708672 G T TRUE FALSE FALSE 1 43 44 chr17 37360844 rs72823350 G A FALSE TRUE TRUE 29 0 30 chr17 40835649 rs4028634 T C TRUE FALSE FALSE 5 46 51 chr17 77707018 rs9916601 C T TRUE FALSE TRUE 23 0 24 chr19 37825633 rs10404602 A T TRUE FALSE FALSE 23 0 23 chr19 53696304 rs36087697 G A FALSE TRUE FALSE 23 0 24 chr19 53696519 rs11084223 A G FALSE TRUE FALSE 46 3 49 chr22 37258986 rs760517 C T FALSE TRUE FALSE 1 26 27 chr22 42078666 rs6519270 A G TRUE FALSE TRUE 2 35 37 chr22 50338497 rs62234039 A G FALSE TRUE FALSE 0 27 27 chrX 12989700 rs73184235 C T TRUE FALSE FALSE 1 26 27 chrX 12992007 rs936668 C A TRUE FALSE FALSE 2 50 52 chrX 12992884 rs75112573 T A TRUE FALSE FALSE 2 45 47 chrX 12994250 rs955279 A G TRUE FALSE FALSE 31 183 214 chrX 12995343 rs35474586 C G TRUE FALSE FALSE 42 231 273 chrX 12995544 rs36021091 A G TRUE FALSE FALSE 45 232 277 chrX 12996475 rs73184236 A G TRUE FALSE FALSE 33 116 149 chrX 13102110 rs4830486 G A FALSE TRUE FALSE 37 0 37 chrX 21857591 rs6528055 C A FALSE TRUE FALSE 1 54 55 chrX 23685964 rs496067 T C TRUE FALSE FALSE 33 2 35 chrX 47510234 rs6609542 A G TRUE FALSE FALSE 22 0 22 chrX 48433499 rs2249583 C G FALSE TRUE FALSE 2 31 33 chrX 48433529 rs2249585 C T FALSE TRUE FALSE 1 31 32 chrX 48437018 rs235827 T C FALSE TRUE FALSE 0 28 28 chrX 48438379 rs235826 A G FALSE TRUE FALSE 1 26 27 chrX 48754937 rs55721510 C T FALSE TRUE FALSE 1 37 38 chrX 65235851 rs73213398 G A TRUE FALSE FALSE 49 2 51 chrX 70338399 rs11796153 A G TRUE FALSE FALSE 41 3 44 chrX 74144157 rs73216285 G T FALSE TRUE FALSE 0 26 27 chrX 100648854 rs73250685 A G FALSE TRUE FALSE 0 28 28 chrX 117662452 rs6646228 C T TRUE FALSE FALSE 28 0 28 chrX 118925450 rs28384478 A G TRUE FALSE FALSE 117 1 119 chrX 118925705 rs2240448 C T TRUE FALSE FALSE 120 7 127 chrX 119005705 rs708463 C G FALSE TRUE FALSE 0 46 46 chrX 148622539 rs41302150 C T FALSE TRUE FALSE 41 2 43