chr pos id ref alt mat pat unphased ref alt tot chr1 1981836 rs56380654 C T TRUE FALSE FALSE 0 23 23 chr1 6501062 rs3817912 C T FALSE TRUE FALSE 30 0 30 chr1 6508357 rs4071665 G A TRUE FALSE FALSE 32 0 32 chr1 17019788 rs660538 G A TRUE FALSE FALSE 38 0 57 chr1 17019802 rs576320 A G FALSE TRUE FALSE 1 33 53 chr1 17020163 rs658827 G A TRUE FALSE FALSE 45 4 49 chr1 17025500 rs583470 G C FALSE TRUE FALSE 42 3 45 chr1 22469072 rs183472573 C A FALSE TRUE FALSE 33 0 33 chr1 23750643 rs114325632 C A FALSE TRUE FALSE 22 0 22 chr1 24829434 rs138442418 C T FALSE TRUE FALSE 24 0 26 chr1 39957913 rs4660269 A G FALSE TRUE FALSE 0 33 33 chr1 50513872 rs143333748 C T FALSE TRUE FALSE 23 0 23 chr1 121137911 rs188372552 G C FALSE TRUE FALSE 22 0 25 chr1 147727851 rs2999692 C G TRUE FALSE FALSE 0 23 23 chr1 155054585 rs188559072 G A TRUE FALSE FALSE 41 0 41 chr1 156894486 rs145905660 C T FALSE TRUE FALSE 22 0 26 chr1 161579687 rs41299300 C G FALSE TRUE FALSE 25 1 26 chr1 180198472 rs181889185 C A TRUE FALSE FALSE 33 0 33 chr1 197885017 rs79935349 C T TRUE FALSE FALSE 33 0 33 chr1 202613752 rs4460695 C T TRUE FALSE FALSE 0 25 25 chr1 202613753 rs60431071 A G TRUE FALSE FALSE 0 25 25 chr1 210425042 rs192132291 T G FALSE TRUE FALSE 25 0 25 chr1 226411317 rs10915962 C T TRUE FALSE FALSE 0 28 28 chr1 228783021 rs190292498 A C FALSE TRUE FALSE 55 0 55 chr1 242688293 rs116523324 G A FALSE TRUE FALSE 25 0 25 chr2 27717739 rs188919799 A C TRUE FALSE FALSE 41 0 41 chr2 37408675 rs6722371 A G TRUE FALSE FALSE 22 0 22 chr2 37572907 rs6708822 G A TRUE FALSE FALSE 0 36 36 chr2 65733879 rs702923 T C FALSE TRUE FALSE 0 21 21 chr2 91634671 rs11690081 C T TRUE FALSE FALSE 46 2 50 chr2 91634718 rs77955189 A C TRUE FALSE FALSE 24 0 27 chr2 102804909 rs1971696 G A FALSE TRUE FALSE 0 29 29 chr2 103236080 rs116406674 C G TRUE FALSE FALSE 21 0 21 chr2 110371248 rs6594046 C A FALSE TRUE FALSE 42 0 44 chr2 133110485 rs6759069 T G FALSE TRUE FALSE 23 0 23 chr2 135476253 rs183313283 G A TRUE FALSE FALSE 28 0 28 chr2 145282543 rs190725397 G A FALSE TRUE FALSE 32 0 41 chr2 162271342 rs190992979 T C FALSE TRUE FALSE 27 0 27 chr2 168149775 rs143685188 C G FALSE TRUE FALSE 24 0 24 chr2 176963127 rs847152 C A FALSE TRUE FALSE 0 26 26 chr2 176969703 rs113865045 G A FALSE TRUE FALSE 26 0 26 chr2 177039578 rs6433571 G T TRUE FALSE FALSE 0 22 22 chr2 235861183 rs113283658 G A FALSE TRUE FALSE 30 0 30 chr2 237079400 rs184465562 G A TRUE FALSE FALSE 21 0 24 chr3 30649665 rs145121413 G A FALSE TRUE FALSE 29 0 39 chr3 71842565 rs147266438 A G FALSE TRUE FALSE 21 0 21 chr3 123603993 rs9870499 T A FALSE TRUE FALSE 0 24 24 chr3 125485466 rs183031440 C T TRUE FALSE FALSE 25 0 25 chr4 4228877 rs114824545 G A FALSE TRUE FALSE 24 0 24 chr4 30721643 rs180810757 A C FALSE TRUE FALSE 25 0 25 chr4 48046159 rs6848507 A G TRUE FALSE FALSE 0 37 37 chr4 126236959 rs7676612 C A FALSE TRUE FALSE 24 0 24 chr4 141490379 rs1800660 T G TRUE FALSE FALSE 36 0 49 chr4 152330469 rs62327201 C T FALSE TRUE FALSE 43 0 43 chr4 164253546 rs151099707 C T FALSE TRUE FALSE 36 0 36 chr4 186049367 rs112964388 A G TRUE FALSE FALSE 31 0 31 chr5 1005164 rs115570887 T C FALSE TRUE FALSE 29 0 29 chr5 1005474 rs186137931 T C FALSE TRUE FALSE 21 0 21 chr5 72529895 rs112777870 C G TRUE FALSE FALSE 38 0 38 chr5 72743925 rs7705335 G C FALSE TRUE FALSE 31 0 31 chr5 76252375 rs32898 A G TRUE FALSE FALSE 0 28 28 chr5 76252488 rs113106833 G T TRUE FALSE FALSE 0 21 21 chr5 76923779 rs144662943 G A FALSE TRUE FALSE 39 0 39 chr5 79331194 rs4425490 A G TRUE FALSE FALSE 0 38 38 chr5 134368593 rs7718271 C A FALSE TRUE FALSE 32 0 32 chr5 157002628 rs182321823 C A TRUE FALSE FALSE 22 0 26 chr5 157003481 rs185300280 G T FALSE TRUE FALSE 30 0 30 chr5 159739570 rs151268241 C A FALSE TRUE FALSE 28 0 28 chr5 172672443 rs10035534 G C TRUE FALSE FALSE 33 0 33 chr6 17281185 rs147407483 C G FALSE TRUE FALSE 36 0 36 chr6 19838447 rs147448400 C A FALSE TRUE FALSE 34 0 34 chr6 30039138 rs149881787 T C FALSE TRUE FALSE 25 0 25 chr6 50811241 rs2982621 T A FALSE TRUE FALSE 0 22 24 chr6 58147834 rs6908949 A G TRUE FALSE FALSE 9 53 62 chr6 80341320 rs6926093 C G FALSE TRUE FALSE 0 40 40 chr6 80341321 rs6926397 G C FALSE TRUE FALSE 0 38 38 chr6 138427701 rs146827666 C A FALSE TRUE FALSE 25 0 32 chr6 138428727 rs13219902 T G FALSE TRUE FALSE 0 25 25 chr6 150359015 rs140914387 T C TRUE FALSE FALSE 26 0 29 chr6 166581383 rs9348090 G C TRUE FALSE FALSE 30 0 32 chr7 3341390 rs10228086 T C FALSE TRUE FALSE 0 36 36 chr7 36406604 rs13224273 G C FALSE TRUE FALSE 32 0 32 chr7 49813066 rs188150144 G T TRUE FALSE FALSE 24 0 28 chr7 49816132 rs189800836 G T TRUE FALSE FALSE 26 0 26 chr7 64974351 rs62470502 A C TRUE FALSE FALSE 0 21 21 chr7 69062710 rs188848811 T A TRUE FALSE FALSE 24 0 40 chr7 82072471 rs2190232 T C TRUE FALSE FALSE 0 23 23 chr7 116139718 rs3735625 T G FALSE TRUE FALSE 0 33 33 chr7 129419587 rs186055599 C T FALSE TRUE FALSE 30 0 31 chr7 155264377 rs10251163 C A FALSE TRUE FALSE 0 32 32 chr8 6949916 rs12549056 G C FALSE TRUE FALSE 0 26 26 chr8 8820969 rs6994163 G A FALSE TRUE FALSE 29 0 32 chr8 10917138 rs191770876 G T TRUE FALSE FALSE 26 0 31 chr8 20161329 rs77646768 C T TRUE FALSE FALSE 31 0 31 chr8 23081644 rs6986618 A T TRUE FALSE FALSE 0 27 27 chr8 131455469 rs7464740 C A FALSE TRUE FALSE 0 44 44 chr8 131455887 rs150691716 C A TRUE FALSE FALSE 32 0 33 chr8 132051139 rs148137469 G A FALSE TRUE FALSE 24 0 24 chr8 145562032 rs112458553 G A FALSE TRUE FALSE 0 27 27 chr9 111973 rs4740977 G A FALSE TRUE FALSE 0 33 33 chr9 33677002 rs181920707 C G TRUE FALSE FALSE 36 0 36 chr9 77502121 rs141780811 C A FALSE TRUE FALSE 29 0 39 chr9 80646298 rs189980551 G A FALSE TRUE FALSE 23 0 23 chr10 46993449 rs3127805 A C TRUE FALSE FALSE 2 29 31 chr10 46993499 rs3127806 T C TRUE FALSE FALSE 3 39 42 chr10 46993508 rs3127807 A C TRUE FALSE FALSE 3 42 45 chr10 46993679 rs3120480 T G TRUE FALSE FALSE 2 35 37 chr10 46993744 rs112743949 C T FALSE TRUE FALSE 31 2 33 chr10 72238763 rs7070313 G T TRUE FALSE FALSE 21 0 21 chr10 101287610 rs10786558 G A FALSE TRUE FALSE 0 24 24 chr10 102984445 rs183020371 G A FALSE TRUE FALSE 40 0 40 chr10 118501608 rs189308147 G T FALSE TRUE FALSE 26 0 26 chr10 118926234 rs74731001 G A FALSE TRUE FALSE 28 0 28 chr11 8290164 rs7943479 C G TRUE FALSE FALSE 47 0 47 chr11 9113146 rs7126036 C T TRUE FALSE FALSE 26 0 26 chr11 27722278 rs61888800 G T FALSE TRUE FALSE 24 0 24 chr11 27741953 rs75029500 C T FALSE TRUE FALSE 52 0 52 chr11 31829409 rs140709246 G A FALSE TRUE FALSE 26 0 36 chr11 32453955 rs143761202 G C TRUE FALSE FALSE 27 0 27 chr11 46259457 rs144993075 C T FALSE TRUE FALSE 21 0 21 chr11 106888608 rs3107973 G A TRUE FALSE FALSE 32 0 32 chr11 111383115 rs10789838 C T FALSE TRUE FALSE 0 33 33 chr11 113931474 rs181426000 G T FALSE TRUE FALSE 24 0 24 chr11 114507873 rs147222451 A G TRUE FALSE FALSE 28 0 28 chr11 117668104 rs11216549 C G FALSE TRUE FALSE 0 23 23 chr11 118757191 rs1790192 G A FALSE TRUE FALSE 22 0 30 chr11 124713247 rs74429416 G C FALSE TRUE FALSE 29 0 29 chr11 129940378 rs61216509 G C FALSE TRUE FALSE 23 0 29 chr11 130725926 rs187019115 A G TRUE FALSE FALSE 31 0 33 chr12 14721605 rs10772790 T G FALSE TRUE FALSE 0 21 21 chr12 15681384 rs2080474 A G FALSE TRUE FALSE 0 25 25 chr12 33046370 rs186961969 C A FALSE TRUE FALSE 22 0 22 chr12 49931867 rs1150056 A C TRUE FALSE FALSE 0 32 32 chr12 58027307 rs2619468 C A TRUE FALSE FALSE 22 0 24 chr12 96585289 rs146247913 C T FALSE TRUE FALSE 28 0 28 chr12 103358794 rs192128317 G T FALSE TRUE FALSE 32 0 32 chr13 25670813 rs3002212 C T FALSE TRUE FALSE 22 0 22 chr13 28550727 rs4771200 C T FALSE TRUE FALSE 0 30 30 chr13 50701190 rs2066590 G A TRUE FALSE FALSE 52 0 53 chr13 100637834 rs186543347 C G TRUE FALSE FALSE 21 0 21 chr14 61188611 rs183484874 C T FALSE TRUE FALSE 35 0 36 chr14 61655082 rs68106703 A C FALSE TRUE FALSE 25 0 25 chr14 77591546 rs80059350 C G FALSE TRUE FALSE 27 0 27 chr15 80696769 rs186548199 G T FALSE TRUE FALSE 27 0 27 chr16 2392039 rs113500306 G C FALSE TRUE FALSE 23 0 23 chr16 21675519 rs185051014 C G FALSE TRUE FALSE 46 0 47 chr16 73097264 rs150635341 G A FALSE TRUE FALSE 28 0 29 chr16 74441071 rs142876884 G A TRUE FALSE FALSE 0 27 27 chr16 84402133 rs13330390 G T TRUE FALSE FALSE 0 23 23 chr17 1929074 rs34281014 C G FALSE TRUE FALSE 34 0 41 chr17 16570067 rs28525101 G C FALSE TRUE FALSE 1 37 38 chr17 21455337 rs72624978 A T TRUE FALSE FALSE 33 0 33 chr17 29886340 rs183604092 C T FALSE TRUE FALSE 31 0 38 chr17 35289281 rs180890403 T G TRUE FALSE FALSE 30 0 30 chr17 38747927 rs2315012 T C TRUE FALSE FALSE 0 22 22 chr17 38747928 rs2315013 A G TRUE FALSE FALSE 0 22 22 chr17 46797439 rs8075822 A T FALSE TRUE FALSE 0 41 41 chr17 46892328 rs520878 T C TRUE FALSE FALSE 0 25 25 chr17 47071518 rs184528129 G A TRUE FALSE FALSE 25 0 33 chr17 47075915 rs4794017 G A FALSE TRUE FALSE 33 0 33 chr17 48074225 rs77131519 G T FALSE TRUE FALSE 28 0 28 chr17 72968974 rs183213788 C T FALSE TRUE FALSE 29 0 29 chr17 79371210 rs8074440 A C TRUE FALSE FALSE 1 26 28 chr17 79448543 rs189102506 T C FALSE TRUE FALSE 26 0 30 chr17 80291480 rs4789764 T C TRUE FALSE FALSE 23 0 24 chr17 81039544 rs8069795 A C FALSE TRUE FALSE 36 1 37 chr18 22931210 rs186546109 G A TRUE FALSE FALSE 27 1 28 chr18 22931873 rs187983058 C G TRUE FALSE FALSE 44 0 44 chr18 47892708 rs140645154 T A TRUE FALSE FALSE 0 27 27 chr19 5338975 rs12985118 T C TRUE FALSE FALSE 23 0 27 chr19 5805658 rs61027285 A G TRUE FALSE FALSE 24 0 24 chr19 10531621 rs185285765 C G FALSE TRUE FALSE 22 0 22 chr19 18714933 rs186560700 C A FALSE TRUE FALSE 26 0 27 chr19 46974728 rs3760832 C T FALSE TRUE FALSE 0 31 31 chr20 1166037 rs909880 A G FALSE TRUE FALSE 0 25 25 chr20 4128359 rs2422915 C G FALSE TRUE FALSE 31 0 32 chr20 44936630 rs57643067 G A FALSE TRUE FALSE 25 0 41 chr20 62947970 rs190531286 G T FALSE TRUE FALSE 22 0 24 chr21 36042315 rs183914556 A G FALSE TRUE FALSE 24 0 24 chr22 23908009 rs2330598 G C FALSE TRUE FALSE 23 0 23 chr22 29469262 rs139628031 C G TRUE FALSE FALSE 32 0 35 chr22 29876374 rs7288867 T C TRUE FALSE FALSE 33 0 33 chr22 37815947 rs763062 C G TRUE FALSE FALSE 0 23 23 chr22 42306952 rs190147271 G A TRUE FALSE FALSE 25 0 25 chr22 45149347 rs132432 T C FALSE TRUE FALSE 0 21 21 chr22 45149351 rs35447449 T C FALSE TRUE FALSE 0 23 23 chrX 23350632 rs191429551 A C FALSE TRUE FALSE 22 0 22 chrX 44077928 rs188475742 A T TRUE FALSE FALSE 21 0 21