chr pos id ref alt mat pat unphased ref alt tot chr1 17731117 rs1555660 T C FALSE TRUE TRUE 0 29 29 chr1 29100180 rs472688 G A FALSE TRUE FALSE 0 47 47 chr1 67874047 rs79139810 C A TRUE FALSE FALSE 62 0 62 chr1 91354543 rs1626407 T C FALSE TRUE FALSE 0 24 24 chr1 120692131 rs11487689 G T TRUE FALSE TRUE 113 0 113 chr1 159016762 rs72709544 A G TRUE FALSE TRUE 25 0 25 chr2 3632474 rs59112398 G A FALSE TRUE FALSE 0 23 25 chr2 10919228 rs2707816 T C TRUE FALSE FALSE 0 27 27 chr2 89155489 rs232232 G A TRUE FALSE FALSE 139 294 435 chr2 89159180 rs6547795 C T FALSE TRUE FALSE 167 59 226 chr2 89159481 rs79259055 G A TRUE FALSE FALSE 56 170 226 chr2 89160499 rs111348814 T G FALSE TRUE FALSE 103 0 106 chr2 89160920 rs116283878 C G FALSE TRUE FALSE 28 0 44 chr2 89161008 rs111432216 G A FALSE TRUE FALSE 39 0 41 chr2 89161155 rs111419404 T C FALSE TRUE FALSE 36 0 36 chr2 89161237 rs115343779 A G FALSE TRUE FALSE 36 0 36 chr2 89164467 rs2848112 T C TRUE FALSE FALSE 32 0 33 chr2 89185042 rs112799290 G C TRUE FALSE FALSE 10 116 126 chr4 146050803 rs6537330 G T TRUE FALSE FALSE 1 32 33 chr5 148874833 rs75736516 C T TRUE FALSE FALSE 26 0 26 chr6 29912852 rs112145970 T C TRUE FALSE FALSE 45 4 50 chr6 29912856 rs112256355 A T TRUE FALSE FALSE 43 4 48 chr6 29913204 rs115210534 G C FALSE TRUE FALSE 38 4 47 chr6 29914215 rs115314392 T A TRUE FALSE TRUE 114 0 130 chr6 29914244 rs115095578 G A TRUE FALSE TRUE 118 0 124 chr6 29915571 rs115718282 C A FALSE TRUE FALSE 104 7 111 chr6 29916618 rs116706379 G A TRUE FALSE FALSE 8 49 57 chr6 29918218 rs115151171 T C FALSE TRUE TRUE 24 0 24 chr6 31234681 rs9264545 T C TRUE FALSE TRUE 0 40 41 chr6 31235193 rs113509869 T A FALSE TRUE TRUE 0 64 64 chr6 31235200 rs112126458 C T FALSE TRUE TRUE 0 55 55 chr6 32481208 rs68097662 A T TRUE FALSE FALSE 25 0 25 chr6 32481220 rs115342299 A C TRUE FALSE TRUE 24 0 24 chr6 32543118 rs9269501 C T TRUE FALSE FALSE 36 0 36 chr6 32543121 rs9269502 A G FALSE TRUE TRUE 35 1 36 chr6 32543594 rs9269518 T C TRUE FALSE FALSE 46 4 57 chr6 32543816 rs41284603 A G TRUE FALSE TRUE 60 1 106 chr6 32544756 rs34154137 T C FALSE TRUE TRUE 44 0 63 chr6 32545862 rs9269640 C T TRUE FALSE FALSE 43 7 62 chr6 32546302 rs41287158 T C TRUE FALSE FALSE 39 2 42 chr6 32550971 rs9269885 A T TRUE FALSE FALSE 25 0 30 chr6 36580235 rs79405061 A G FALSE TRUE FALSE 44 8 52 chr8 66623227 rs57516975 G T FALSE TRUE TRUE 0 85 87 chr8 101719004 rs62513924 G A TRUE FALSE TRUE 26 0 31 chr8 101719201 rs72681439 A G FALSE TRUE TRUE 23 0 29 chr8 144684215 rs10093709 A G FALSE TRUE FALSE 0 24 24 chr9 130557580 rs4837182 A G FALSE TRUE FALSE 0 43 44 chr11 18430132 rs12804008 T C FALSE TRUE FALSE 0 52 52 chr13 23489779 rs73431465 G C FALSE TRUE FALSE 0 25 25 chr14 50086276 rs3007040 G A FALSE TRUE FALSE 0 28 28 chr14 106321371 rs61498434 G A TRUE FALSE FALSE 151 70 221 chr14 106321840 rs59117917 G A FALSE TRUE FALSE 181 0 243 chr14 106326089 rs116787824 G A FALSE TRUE FALSE 113 1 114 chr14 106327198 rs73376324 T A FALSE TRUE FALSE 99 237 338 chr14 106329468 rs112183172 A G FALSE TRUE FALSE 139 0 202 chr17 1676341 rs59711072 G A FALSE TRUE FALSE 27 0 27 chr17 78261283 rs73444339 A G FALSE TRUE FALSE 0 32 32 chr19 5696146 rs3745624 G A FALSE TRUE FALSE 0 28 28 chr19 18167257 rs398668 T C FALSE TRUE TRUE 0 35 36 chr22 36749531 rs6000255 G A FALSE TRUE FALSE 0 23 23 chr22 39700758 rs17000979 C T TRUE FALSE FALSE 0 23 23 chrX 12910619 rs2269809 T G FALSE TRUE FALSE 30 2 32 chrX 12993511 rs115781169 C T TRUE FALSE FALSE 19 151 170 chrX 19549211 rs57685168 T C TRUE FALSE FALSE 31 1 32 chrX 48438073 rs73487679 G A FALSE TRUE FALSE 11 58 69 chrX 73454707 rs174198 C T TRUE FALSE FALSE 26 1 27 chrX 100651649 rs114935073 C A TRUE FALSE FALSE 74 8 83 chrX 106955678 rs73636307 C G TRUE FALSE FALSE 32 3 35 chrX 108878820 rs73534454 G A FALSE TRUE FALSE 3 34 37 chrX 108966425 rs2147518 A C TRUE FALSE FALSE 35 2 37 chrX 108966650 rs73536332 C T FALSE TRUE FALSE 1 33 34 chrX 118749139 rs305157 T C FALSE TRUE FALSE 5 43 48 chrX 118751732 rs305154 T C FALSE TRUE FALSE 19 67 86 chrX 118751950 rs305153 G A FALSE TRUE FALSE 11 51 62 chrX 128931153 rs13441194 G C FALSE TRUE FALSE 7 46 53 chrX 128931794 rs704868 T C TRUE FALSE FALSE 55 10 65 chrX 128931978 rs760819 G T TRUE FALSE FALSE 51 9 60 chrX 128932474 rs742247 A C TRUE FALSE FALSE 62 15 77 chrX 135947886 rs56036032 A G FALSE TRUE FALSE 4 39 44 chrX 135950183 rs73228726 T C TRUE FALSE FALSE 61 5 66 chrX 135950219 rs5975811 T C FALSE TRUE FALSE 8 53 61 chrX 153576750 rs7891985 T C FALSE TRUE FALSE 37 2 39 chrX 153626738 rs915942 G A FALSE TRUE FALSE 53 11 64 chrX 153755625 rs73573464 G A FALSE TRUE FALSE 26 1 27