chr pos id ref alt mat pat unphased ref alt tot chr1 67874047 rs79139810 C A TRUE FALSE FALSE 61 0 61 chr1 67874056 rs79265837 A G TRUE FALSE FALSE 69 0 69 chr1 101840798 rs10874481 C T TRUE FALSE FALSE 0 29 29 chr1 120692131 rs11487689 G T FALSE TRUE TRUE 140 0 140 chr1 159016762 rs72709544 A G TRUE FALSE TRUE 26 0 26 chr2 55768810 rs78628710 C T TRUE FALSE FALSE 22 0 22 chr2 89155540 rs72930699 A T FALSE TRUE FALSE 299 487 786 chr2 89159282 rs232226 T C TRUE FALSE FALSE 276 134 412 chr2 89160048 rs114214348 A G TRUE FALSE FALSE 86 168 330 chr2 89160235 rs10202926 C T FALSE TRUE FALSE 52 143 317 chr2 89160244 rs10203079 G A FALSE TRUE FALSE 57 152 334 chr2 89160816 rs116199684 A G TRUE FALSE FALSE 61 172 246 chr2 89160846 rs114271391 G C TRUE FALSE FALSE 72 206 290 chr2 89160965 rs114703253 G A TRUE FALSE FALSE 72 167 249 chr2 89161203 rs72932508 C A FALSE TRUE FALSE 52 0 81 chr2 89161547 rs232222 A G TRUE FALSE FALSE 0 62 67 chr2 89164394 rs57740615 T C FALSE TRUE TRUE 65 0 70 chr2 89164518 rs114498355 T C TRUE FALSE FALSE 3 55 64 chr2 89164688 rs114473120 T C TRUE FALSE FALSE 7 59 67 chr2 89164694 rs114396698 T C TRUE FALSE FALSE 7 55 63 chr2 89165053 rs115499794 T C TRUE FALSE FALSE 4 50 58 chr2 89165270 rs116619837 T A TRUE FALSE FALSE 8 54 65 chr2 89165285 rs115227964 T G FALSE TRUE FALSE 56 0 59 chr2 89165286 rs115100073 T C FALSE TRUE FALSE 58 0 61 chr2 89165813 rs10175553 G A FALSE TRUE FALSE 30 2 32 chr2 89268401 rs11899233 T C TRUE FALSE TRUE 1 28 29 chr2 89270550 rs10195966 G A FALSE TRUE TRUE 0 26 26 chr2 89294839 rs11127108 A G TRUE FALSE TRUE 0 41 41 chr2 231289783 rs76597264 A G TRUE FALSE FALSE 22 0 22 chr4 74435530 rs28649713 A C TRUE FALSE FALSE 27 1 28 chr4 74437054 rs11930946 T C TRUE FALSE FALSE 52 4 57 chr4 74437998 rs10004505 G A FALSE TRUE TRUE 34 2 36 chr6 29912961 rs115726177 G T FALSE TRUE TRUE 50 4 55 chr6 29913734 rs111727146 C T FALSE TRUE FALSE 8 67 79 chr6 31234681 rs9264545 T C FALSE TRUE TRUE 0 37 39 chr6 31321803 rs113809819 G A TRUE FALSE FALSE 64 4 102 chr6 31321807 rs146226748 G A FALSE TRUE FALSE 4 67 102 chr6 31323067 rs114505907 G C TRUE FALSE FALSE 38 1 39 chr6 31323069 rs116109783 T C TRUE FALSE FALSE 41 1 42 chr6 31323233 rs145627832 A G TRUE FALSE TRUE 58 4 75 chr6 32412005 rs115317719 G T TRUE FALSE FALSE 46 6 52 chr6 32542485 rs79989685 A G TRUE FALSE FALSE 26 0 28 chr6 32542563 rs9269479 A G FALSE TRUE FALSE 1 37 40 chr6 32543148 rs41294138 T C FALSE TRUE TRUE 23 0 32 chr6 32543570 rs41294267 G A TRUE FALSE FALSE 30 2 38 chr6 32543715 rs9269528 T A FALSE TRUE TRUE 5 49 54 chr6 32544335 rs9269557 C A FALSE TRUE FALSE 0 45 48 chr6 32544435 rs41284907 T A TRUE FALSE TRUE 124 4 130 chr6 32545262 rs9269612 G A TRUE FALSE FALSE 0 44 58 chr6 32549611 rs1071752 T A FALSE TRUE FALSE 0 28 28 chr6 32554516 rs115046556 A T TRUE FALSE FALSE 48 5 76 chr6 32554570 rs4377810 T C TRUE FALSE FALSE 51 2 77 chr6 32606569 rs9272526 G A TRUE FALSE FALSE 0 26 26 chr6 32606658 rs28375776 C G TRUE FALSE FALSE 0 24 24 chr6 32606794 rs28383359 T C TRUE FALSE FALSE 0 37 37 chr6 32606960 rs78702533 A T TRUE FALSE FALSE 0 27 27 chr6 32607026 rs9272554 A G FALSE TRUE FALSE 31 0 31 chr6 32607439 rs74223467 G C FALSE TRUE FALSE 26 1 27 chr6 32607453 rs9272583 C T FALSE TRUE FALSE 23 0 23 chr6 32609312 rs1129808 A C FALSE TRUE FALSE 24 0 24 chr6 32609371 rs4467816 T C TRUE FALSE FALSE 0 26 26 chr6 32610696 rs62404094 G A TRUE FALSE FALSE 1 29 30 chr6 32610718 rs9272858 C T FALSE TRUE FALSE 29 1 30 chr6 32610749 rs7708 G A TRUE FALSE FALSE 1 30 31 chr6 32610757 rs8227 A G FALSE TRUE FALSE 30 1 31 chr6 32610960 rs1142447 G A FALSE TRUE FALSE 29 1 30 chr6 32611608 rs75220553 A G FALSE TRUE FALSE 29 1 30 chr6 32611611 rs80120853 T C FALSE TRUE FALSE 28 1 29 chr6 32611709 rs36214506 T C TRUE FALSE FALSE 1 31 32 chr6 32611723 rs9273020 G T FALSE TRUE FALSE 30 1 31 chr6 32611725 rs9273021 A G FALSE TRUE FALSE 30 1 31 chr6 32612493 rs9273089 A G FALSE TRUE FALSE 28 1 30 chr6 32612627 rs9273109 A G FALSE TRUE FALSE 41 6 48 chr6 32613610 rs9273209 C T FALSE TRUE FALSE 33 0 33 chr6 32613712 rs9273215 G A FALSE TRUE FALSE 40 0 40 chr6 32613746 rs9273216 C A FALSE TRUE FALSE 51 0 51 chr6 32613817 rs9273225 A G FALSE TRUE FALSE 56 0 56 chr6 32613824 rs9273226 C T FALSE TRUE FALSE 52 0 52 chr6 32614025 rs9273241 C T FALSE TRUE FALSE 63 0 63 chr6 32614080 rs9273242 T C FALSE TRUE FALSE 44 0 44 chr6 32614268 rs9273258 A G TRUE FALSE FALSE 0 88 88 chr6 32614318 rs9273265 G A TRUE FALSE FALSE 0 93 93 chr6 32614361 rs9273270 C T TRUE FALSE FALSE 0 88 88 chr6 32614534 rs9273289 T A FALSE TRUE FALSE 78 0 93 chr6 32614552 rs9273290 C T TRUE FALSE FALSE 75 0 96 chr6 32614573 rs78568738 T C TRUE FALSE FALSE 0 74 81 chr6 32614705 rs17843563 T G FALSE TRUE FALSE 93 22 115 chr6 32614706 rs17612475 G A FALSE TRUE FALSE 91 22 113 chr6 32614726 rs17612482 C T FALSE TRUE FALSE 86 25 111 chr6 32614812 rs79174031 G A FALSE TRUE FALSE 87 31 124 chr6 32614857 rs62404122 G C TRUE FALSE FALSE 37 95 139 chr6 32614883 rs17612510 C T FALSE TRUE FALSE 100 37 141 chr6 32614928 rs17612526 T C FALSE TRUE FALSE 91 12 104 chr6 32614963 rs28529717 A G TRUE FALSE FALSE 0 86 87 chr6 32615243 rs112061353 G C TRUE FALSE FALSE 0 112 112 chr6 32615310 rs78337030 A G TRUE FALSE FALSE 4 117 125 chr6 32615457 rs28479464 T C TRUE FALSE FALSE 44 113 160 chr6 32615458 rs17612576 G A TRUE FALSE FALSE 112 44 159 chr6 32615753 rs114400689 T G TRUE FALSE FALSE 14 110 124 chr6 32615754 rs17612640 G A FALSE TRUE FALSE 108 13 121 chr6 32615903 rs77770300 A G FALSE TRUE FALSE 82 0 82 chr6 32615963 rs62404123 A G TRUE FALSE FALSE 1 83 85 chr6 32626397 rs113616416 C T FALSE TRUE TRUE 62 5 79 chr6 32626403 rs113453523 A G FALSE TRUE TRUE 65 7 84 chr6 32628890 rs9273550 G A FALSE TRUE FALSE 26 1 27 chr6 32628996 rs9273560 C A FALSE TRUE FALSE 26 0 26 chr6 33058702 rs116449251 A G FALSE TRUE FALSE 34 103 137 chr6 43379841 rs9357411 A T FALSE TRUE FALSE 0 28 28 chr7 139043350 rs73154137 G A FALSE TRUE TRUE 42 2 44 chr8 66623227 rs57516975 G T FALSE TRUE TRUE 1 27 78 chr8 66623229 rs62507639 G T TRUE FALSE FALSE 28 0 79 chr8 101719004 rs62513924 G A TRUE FALSE TRUE 25 0 35 chr8 101730073 rs72681443 T C TRUE FALSE TRUE 30 0 33 chr10 26862576 rs116329505 C T FALSE TRUE FALSE 26 0 26 chr10 75499941 rs79041687 C T FALSE TRUE TRUE 29 0 29 chr10 135237409 rs115192224 A G FALSE TRUE FALSE 0 29 29 chr11 323720 rs72867742 T C FALSE TRUE TRUE 22 0 28 chr12 9861959 rs79694722 A G FALSE TRUE TRUE 29 0 42 chr12 104348482 rs2700507 A G TRUE FALSE TRUE 25 76 101 chr12 104349417 rs73388292 A T TRUE FALSE TRUE 13 76 89 chr12 104349525 rs7310423 T C TRUE FALSE TRUE 11 61 72 chr12 104349688 rs2700505 T C TRUE FALSE TRUE 14 87 101 chr12 104349795 rs114115542 C G TRUE FALSE FALSE 20 74 94 chr13 24992006 rs73469517 A T FALSE TRUE TRUE 34 0 34 chr14 106318342 rs2256593 T C FALSE TRUE FALSE 232 125 359 chr14 106320092 rs2256346 C T FALSE TRUE FALSE 311 99 411 chr14 106321197 rs114079620 G A FALSE TRUE FALSE 277 76 354 chr14 106321371 rs61498434 G A TRUE FALSE FALSE 63 232 297 chr14 106321663 rs1059216 T C TRUE FALSE FALSE 64 263 327 chr14 106321913 rs1136534 G A FALSE TRUE FALSE 172 44 216 chr14 106322388 rs2753506 G A FALSE TRUE FALSE 220 69 289 chr14 106322561 rs3751511 G A FALSE TRUE FALSE 210 66 276 chr14 106322972 rs1956596 G A FALSE TRUE FALSE 219 81 301 chr14 106323864 rs2338629 T A FALSE TRUE FALSE 171 45 216 chr14 106326583 rs114451987 G C TRUE FALSE FALSE 168 64 329 chr14 106326995 rs116168801 C T TRUE FALSE FALSE 351 61 424 chr14 106328081 rs115910995 G C TRUE FALSE FALSE 100 310 527 chr14 106329919 rs3752943 G A TRUE FALSE FALSE 43 124 169 chr14 106926388 rs2467910 T C FALSE TRUE TRUE 0 47 47 chr14 106926973 rs2427700 A G TRUE FALSE TRUE 1 198 209 chr14 106927029 rs10150684 A G FALSE TRUE TRUE 1 160 222 chr14 106927036 rs10150687 A G TRUE FALSE TRUE 2 169 225 chr14 106927167 rs2337943 A G TRUE FALSE TRUE 2 156 173 chr15 59434328 rs2414621 T A FALSE TRUE TRUE 0 24 24 chr17 5276934 rs2523156 G C FALSE TRUE FALSE 0 26 26 chr17 8697362 rs72848118 C T FALSE TRUE TRUE 1 71 72 chr19 36157167 rs10422762 G A FALSE TRUE FALSE 0 24 24 chr22 39441203 rs4821862 C T FALSE TRUE TRUE 0 32 32 chrX 24095578 rs114095209 C G TRUE FALSE TRUE 24 0 25 chrX 133901603 rs115257786 G A TRUE FALSE FALSE 24 0 24 chrX 135962854 rs113867260 C A TRUE FALSE FALSE 50 0 51